| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6502 |
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| Symbol | |
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| ID | 8362686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8164304 |
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| End bp | 8165329 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968630 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003126107 |
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| Protein GI | 256425454 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.607973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT TAAAGAATGA CCTTTTACTG AGAGCTTTAC GCGGAGAAAC AACAGAACGT
GTTCCTGTGT GGATGATGCG CCAGGCTGGC CGCTACCTGC CTGACTATAT CAAACTGCGG
GAGAAATACT CCTTCTTTGA ACGCTGTATG AACCCCGAAC TGGCTACGGA AATCACTGTG
ATGCCCGTAC ACCAGGTAGG CGTAGATGCT GCCATCATCT TCTCTGATAT TCTCGTAGTG
CCACAGGCAA TGGGTATGGA AGTACAGCTG ATCGAAAAGA TCGGTCCTGT ATTGCCGGAT
CCGGTAAAAG GTGCAGCTGA TCTTCAGAAA CTCTGCGTTC CTGATGTAAA GGACACCCTC
AATTACGTAT TTGAAGCGTT GGCTTTAACC AAGAAAACAC TGGATGGCGC TGTTCCGCTG
ATCGGTTTTG CAGGTGCACC ATGGACATTG CTCTGCTACA TGGTACAGGG TAAAGGTTCC
AAGACTTTCG ATGCGGCTAA AGCATTTTGC TACCAGCAAC CGGAAGTAGC ACATCAGCTG
CTTCAGATGA TCACTGATAC AACGATCGCT TACCTGAAAG AACAGGTAAA AGCAGGCGCA
GACTGCTTAC AGTTGTTTGA TTCATGGGGT GGTCTGCTCA GTCCTCAGGA CTTCGAAAAC
TTCTCTCTTC AATATATGCG TCAGATCGTG GCTGCACTGA AAGATGTGTG CCCGGTTACC
GTATTTGCCA AAGGTGCGTG GTTTGCACTG GAAGAAATGG CGGCTACCGG CGCTAACTGT
CTGGGTGTTG ACTGGGCTAT TCAGCCAGCC CGCGCAAGAC AGTTCGCAGG TAATAATGTC
ACCCTTCAGG GTAACTTCGA TCCTGCCAAA TTACTGGCTC CGATTCCTGA GATCAAAAAA
TCAGTAAAAG AAATGCTGAC CGGCTTTGGT AAACATCGCT ACATTGCGAA CCTCGGCCAT
GGTATCCTGC CAAATGTGCC GGTTGACCAC GCAAGAGCAT TTATCGATAC TGTCAAGGAA
TTCTAA
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| Protein sequence | MSALKNDLLL RALRGETTER VPVWMMRQAG RYLPDYIKLR EKYSFFERCM NPELATEITV
MPVHQVGVDA AIIFSDILVV PQAMGMEVQL IEKIGPVLPD PVKGAADLQK LCVPDVKDTL
NYVFEALALT KKTLDGAVPL IGFAGAPWTL LCYMVQGKGS KTFDAAKAFC YQQPEVAHQL
LQMITDTTIA YLKEQVKAGA DCLQLFDSWG GLLSPQDFEN FSLQYMRQIV AALKDVCPVT
VFAKGAWFAL EEMAATGANC LGVDWAIQPA RARQFAGNNV TLQGNFDPAK LLAPIPEIKK
SVKEMLTGFG KHRYIANLGH GILPNVPVDH ARAFIDTVKE F
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