| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6477 |
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| Symbol | |
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| ID | 8362661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8136612 |
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| End bp | 8138327 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968605 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003126082 |
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| Protein GI | 256425429 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0945672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTAC AACATCTTTT AGACACGAAT GAGGCCCGTT TAAAGGCTGT GATTGAGGCA
ACCCCGGAAT GTATCAAAAT TGTAGCCCCG GACGGGACTG TGCAGTTTAT GAACAAGGCC
GGGCTGTGTA TGGTGGATGC TACTGAAGCC CAGACTGTTG AAGGATGCTG CGTATTTGAT
ATTATCGCCG CTGAACACAG GGACCGCTGG ATTGAAAACC ATAACAGGGT ATGCAACGGT
GAAAGCCTGA ACTGGGAATT TGATCTGATC AGCCTGAACG GTACCCGGCG CCATATGGAA
ACACACGCCG TTCCGATGCC CAATGGCGAT GGCACATTTT CACAACTCGC TGTTACCCGT
GATGTTACGG AAAGAAAACG GTCAGAGCAG ACGCTAAAGA GACATGACAT CATTCTCCGG
GGACAAAAAT ATGCGCTGGA ACAGGCTGTA CACGGCAAAC CTATCAAAGA AGTACTGGAA
ACCCTGGTAA AAACAGTGGA GGATCAGTCA GATGGTTCTT TAATGGCCTC CATTCTGCTG
ATAGATCCGG AGGGCAGGCG GATGTTGCAT GGTGCATCAC CCAGTTTGCC TGCCGGTTAC
AATGAGGCCG TCAACGGTGT AGAGATCGGC CCGGCTGTGG GTTCCTGCGG AACTGCTGCC
TTCAGAGGAG AAGAGATTAC CGTACAGAAC ATTGCCGATG ATCCCTTATG GGCCGATTAT
AAAGAACTGG CCTTATCACA TGGTTTGCGC GCCTGCTGGT CCATACCGAT CCTCTCTTCG
CAGCAGCGCC CTATCGCAAC ATTTGCACTC TATTATAGCA TAGAACAAAC ACCTGCTCCG
GAAGACAGGG AAGCGGTGGA ATTACTGGCA AGAACGGCCG GGATCGTGAT AGAATGGTAC
AGGGAGATCG CTGAGCGCAA GGAATTAATG GCCCAATTGG AGACCCGTGT CAGCGAGCGT
ACCAATGAGC TCAATAACGT CAATGCCGCT TTACAGAGCT CTAATGATAC CCTGGAACAG
TTTGCACACG TGGCCAGTCA TGACCTGAAA GAACCGGTCC GGAAGATCAA GATATTCACA
TCCAGACTGG AGGATGAAAC GGGACATTTA CTGAATGAGC GAGGAAAGAC TTACCTCCAT
AAGATCCAGT CATCCGCAGA GCGTATGTCT ACCATGATAG AAGGGGTGCT CAACTACTCT
GTGCAGAACG GAGCCCCTAA GATCAACGAA AAAATAGACC TGAACATCAT CATAGAAGAG
ATCAGGAATG ACCTGGAGGT CGTGATCCAG CAGAAACATG CAGTCGTGAA TGCGGGTCCC
CTACCGGTCA TAGAGGGCGA TCGCATACTG ATACACCAGT TGTTCTATAA TCTGCTGAAC
AATTCACTGA AGTTCACTAC TGAGCAGGAG CGACCTGTCA TCACCATTGA AGCGACGCCG
GTGCTGCAAC ACGAGGATGC CAGTTATAAT ATTCTGATAA CGGATAACGG TATCGGCTTT
GATCAGCAGC AAAGCGAAAA GATATTCGAT ACCTTCACCC GCCTGAATTC AAAGGACAAA
TACGACGGTA CGGGCCTCGG ACTGGCCTTG TGTAAGAAGA TCGTACAACG CCATCATGGG
ACTATTATGG CGAGCAGTGA AAATGGGAAA GGCGCTACTT TCAGTCTGAT ATTGCCAGTC
GTACAACCCG CATCAGCCGA TCTGCAACCC GTATAA
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| Protein sequence | MQVQHLLDTN EARLKAVIEA TPECIKIVAP DGTVQFMNKA GLCMVDATEA QTVEGCCVFD
IIAAEHRDRW IENHNRVCNG ESLNWEFDLI SLNGTRRHME THAVPMPNGD GTFSQLAVTR
DVTERKRSEQ TLKRHDIILR GQKYALEQAV HGKPIKEVLE TLVKTVEDQS DGSLMASILL
IDPEGRRMLH GASPSLPAGY NEAVNGVEIG PAVGSCGTAA FRGEEITVQN IADDPLWADY
KELALSHGLR ACWSIPILSS QQRPIATFAL YYSIEQTPAP EDREAVELLA RTAGIVIEWY
REIAERKELM AQLETRVSER TNELNNVNAA LQSSNDTLEQ FAHVASHDLK EPVRKIKIFT
SRLEDETGHL LNERGKTYLH KIQSSAERMS TMIEGVLNYS VQNGAPKINE KIDLNIIIEE
IRNDLEVVIQ QKHAVVNAGP LPVIEGDRIL IHQLFYNLLN NSLKFTTEQE RPVITIEATP
VLQHEDASYN ILITDNGIGF DQQQSEKIFD TFTRLNSKDK YDGTGLGLAL CKKIVQRHHG
TIMASSENGK GATFSLILPV VQPASADLQP V
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