Gene Cpin_6452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6452 
Symbol 
ID8362636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8109105 
End bp8109599 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content43% 
IMG OID644968580 
ProductDihydrofolate reductase 
Protein accessionYP_003126057 
Protein GI256425404 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.816768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACTTT CTATAATCGT TGCGGCTTCT GAAAATAATG TAATAGGGAT CAATAATCAC 
CTGCCCTGGC ATTTACCGGT TGATATGAAA TACTTTAAGG ATACAACGAT GGGGAAACCT
ATCGTAATGG GTCGTAAGTC TTTCGAAGAA CTGGGAAGAG TATTGCCGGG AAGACCTAAT
ATCATGATCA CCCGTCAGAA AGACTATACT GCCGAAGGAC TGCACATCGT GCCTTCCCTG
GAAGCAGGTA TCGAAAAGGC TAAAACCTTT GGTACAGAAG AAATCTTCGT GACCGGTGGT
GGTGAGATCT TCAAAATGGC TTTATCTATA GTAGACAGAG TTTACCTGAC GCGTGTACAT
GCGACAGTAC AAGGAGATAC CTATTTCCCT GAATTCGATC CGAGAGGATG GAAACTGGTA
AAGAATGAAA GGCATGAAAA AGATGAAAAA CATGCGCATG CCCTGACCTT CCAGGTGTGG
GAAAGAGAAC ATTAA
 
Protein sequence
MTLSIIVAAS ENNVIGINNH LPWHLPVDMK YFKDTTMGKP IVMGRKSFEE LGRVLPGRPN 
IMITRQKDYT AEGLHIVPSL EAGIEKAKTF GTEEIFVTGG GEIFKMALSI VDRVYLTRVH
ATVQGDTYFP EFDPRGWKLV KNERHEKDEK HAHALTFQVW EREH