| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6429 |
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| Symbol | |
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| ID | 8362613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8078263 |
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| End bp | 8080410 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968557 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_003126034 |
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| Protein GI | 256425381 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins
[COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0633633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCTC ACTTATTCAA ACATACGCTC CCTGTTATCA CCCTGCTGAT AGGATCATTC
TCAGCAAAAG CACAGTCAGG AGCAGGTCCA TTTATATTGA AAGGACAGGT AGCTGCTAAT
AAATACCCGG CAGTACTTTA TCTCGACTAT GAGGTTGGTG ATAAGAACTG GGTACATGAT
TCTGTCACAC TGAAAGATGG ACACTTCAAA TTCACCGGCA AGCTGAAAAG ACCGGTATCG
GCCAGACTGA TATTTAAAAA CCAACCGGGT TACCGCTACT TTTACCTCCA ACCAGGCACA
GTAGAAGTGA ATACCAGCGG CTCACTGGAT AGCGCTATTG TCAGCGGTAG TCCAAATACC
GCCATACAGG ACAAGTACGC AAAGCTCCGG GAAAGTTACT CCGCTGTCTT CGCAGGATTT
CGTAACAGGT CCTTTTTCAA CCGGGGTAAC CAGGATACCC TGGATGCTGT AAAAGCAGCG
CGGGCTATCG TTGAAAAACA ATATACCAGT ACGCTGGCGG ACTTTATCAG GCAACATGCC
GATACTTACG CTGCCTGGGA TATTGTCTAT AACTGCCATA TCGCATTGGA TCCGGACTTT
ATAACGCCCT TGTTTGACGC CTTGAGTCCG AGACTTAAAA ATGCGCCTGA AGGCAAGGAA
CTGGCTACGC AGATCGCCAA TGTCAGAAGA GTAATGGAGG GTGCTCCTGC GCCTGATTTT
ATACAGTCAG ATGTGAAAGG AAATCAGATC AGCCTGTCTT CTTTTCGTGG TAAATATGTG
CTGGTAGATT TCTGGGCCAG CTGGTGCGGC GTTTGCCGCA TGGAGAACCC GAATGTACTG
CGGGCCTATA ATGTTTTTAA AGATAGGGGG TTCACGGTAT TAGGCGTATC GCTCGACGAT
TCAACGCAAC ATCAGAAATG GCTGAAGGCA ATTGAAGAAG ATAATATGCC CTGGCAGCAG
GTATCAGATC TGAAAGGCAG GAATAATATG GCGGCTGTAC AGTATGGCAT CAGGGGGATT
CCTCAGAACG TGCTGATTGA TCCTAATGGC GTTATAGTAG GCAAAAACCT GCGGGATAAA
GAACTGATGA ACAAGCTGAT CGAAATCTTT GATAAGGGCT ATAATATGCG CATGGAAGGC
GATATCAAGG GTTTTAAAGA CAGCATTATG ATCTTCAGCT ATAACAGGGA CAATACGCAG
GTGCATGATA CGGTACCCGT TCAAAACGGA CAGTTTAACT GGCTGGCATT GATGAAGGAA
CCACAGGCGG TACAGGCGAT CAGTCTGCCA GGGCATCACA TGCTACGGTT CTATTCTGAT
ATCGGATACC TGCAATTCTC GGCAAAAGCC GATTCACTGG CAGCATTTAC CCTGAAAGGT
TCTGCATTAC AGGATGAGGC GAACTTTTTC AAGGCTTCTG TAAAGACCAT TACCGATCAA
CAGACGGAGG TGGTCATGAA ATACTACGCT GCGACAAGTA AAGAGGCACA ACGGCCTTAC
AAAGCGCAAA TGAAGACCTT ACAGGAAGAA TATAACGACC GTGTTAAGCA ATACATTCAG
ACCAATTTTT ACAGTCTGTA TGCCTTGCAA ATGGTAAAAG ACATGGCGGA GAATCTTGCC
GGCCCTGAAT ATGGGGAAGT CAACCCGCTC TTTATGTTAT TGCCGGAAGT AGTACGCGGA
ACACCGACCG GGAAAATAGT GGCAGAAAAG ATGCCTGTTA TAAAAAGACA GGCCATCGGC
GAAGCAGTGA CTAATTTCTC CCAGATTGAT AGTACCGGCA AAAATATATC TATCGCTGAT
TTCAAAGGCA AGTATGTACT GGTAGATTTC TGGGCCAGCT GGTGTGGCCC TTGTCGTGCA
GAAAACCCGA ATGTATTGAA AGCATATGAT GCCTTCAAGG CCAAAGGATT TACGGTAGTA
GGCATTTCCC TGGATACGGA TGCGTTTAAA TGGAAGAAAG CCATCCATGA TGACCATATG
CCATGGACGC AGTTATCTGA CCTGAAAGGC TGGAAAAATG AGGTCGCACA ATACTATGGT
GTACGTGGTA TTCCCTGGAA TATGCTGGTA GGTCCGGATG GTAAGATCAT CGCTAAAGGA
CTCAGAGATG AAGAATTAAT GAGCAAGTTG TCAGAGCTCA TGCAATAA
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| Protein sequence | MRSHLFKHTL PVITLLIGSF SAKAQSGAGP FILKGQVAAN KYPAVLYLDY EVGDKNWVHD
SVTLKDGHFK FTGKLKRPVS ARLIFKNQPG YRYFYLQPGT VEVNTSGSLD SAIVSGSPNT
AIQDKYAKLR ESYSAVFAGF RNRSFFNRGN QDTLDAVKAA RAIVEKQYTS TLADFIRQHA
DTYAAWDIVY NCHIALDPDF ITPLFDALSP RLKNAPEGKE LATQIANVRR VMEGAPAPDF
IQSDVKGNQI SLSSFRGKYV LVDFWASWCG VCRMENPNVL RAYNVFKDRG FTVLGVSLDD
STQHQKWLKA IEEDNMPWQQ VSDLKGRNNM AAVQYGIRGI PQNVLIDPNG VIVGKNLRDK
ELMNKLIEIF DKGYNMRMEG DIKGFKDSIM IFSYNRDNTQ VHDTVPVQNG QFNWLALMKE
PQAVQAISLP GHHMLRFYSD IGYLQFSAKA DSLAAFTLKG SALQDEANFF KASVKTITDQ
QTEVVMKYYA ATSKEAQRPY KAQMKTLQEE YNDRVKQYIQ TNFYSLYALQ MVKDMAENLA
GPEYGEVNPL FMLLPEVVRG TPTGKIVAEK MPVIKRQAIG EAVTNFSQID STGKNISIAD
FKGKYVLVDF WASWCGPCRA ENPNVLKAYD AFKAKGFTVV GISLDTDAFK WKKAIHDDHM
PWTQLSDLKG WKNEVAQYYG VRGIPWNMLV GPDGKIIAKG LRDEELMSKL SELMQ
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