Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6387 |
Symbol | |
ID | 8362571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8027760 |
End bp | 8030123 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968515 |
Product | putative phosphoketolase |
Protein accession | YP_003125992 |
Protein GI | 256425339 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAC TCACTAACGA ACAAGTACAT AACATACAGG CTTACTGGGA AGCATCCAAT TATCTCGCAG CAGCACAGAT CTATCTGCAG GATAATCCAT TGCTGAAAGA TCCGCTGCTG ACCGGCCACA TCAAACCAAG GCTCTTAGGT CACTGGGGGA CTTCTCCAGG TTTGAACTTT ATTTATGTGC ATCTTAACAG ACTCATTAAA TCCAGCGATG CAGATATCCT GTTCATCTGT GGGCCCGGAC ACGGCGCACC AGCAGTTCTT GCACAGACCT GGCTGGAAGG GACCTATACG GAGACCTATC CTGAAATTAC ACAGGATGAA AAAGGAATGA GACAGTTCTT CCGGCAATTC TCCACACCTG GAGGTATTCC CAGTCATGTG AGTGCACATA CACCCGGGTC TGTTCATGAA GGCGGTGAAC TAGGCTATTC CCTGGCACAC GCAGCAGGTG CGGTAATGGA TAATCCCCAT CTCATAGCAG CCTGCGTAGT TGGTGACGGA GAAGCTGAAA CCGGTCCGCT GGCAGGTAGC TGGAAACAGA ACTGTTTCCT CAATCCTGCA CGCGATGGAG CTGTATTACC AATACTGCAT CTCAACGGTT ATAAAATATC CGGTCCTACA GTAATGGGGC GTATGCCGGA TGATGCACTC GCCACCTTAT TTAACGGATA CGGTTACGCG CCTTTATTTG TACGCGCGGC AGATACGATC GGCACACATC AGGAAATGGC CATGGCGCTC GACACAGCTT ATGAACGAAT TAGAGCAATA CAGCAATATG CCAGAGATGG AAAGAAAACA GACGAACGTA CCTTATGGCC GCTCATTATA CTCCGTTCCC CTAAAGGCTG GACAGGTCCT GTCATGTGGA AAGGTAAACC GGTAGAAGGA ACGTTCCGCT CCCACCAGGT ACCACTGCCC GATGTCAGGG AAGATCAGGA CCAGCTGGCC CTGCTGGAAC AATGGTTACG CAGTTATACA CCGGAAAAAC ACTTTACAGC AAATGGCGCT CCACAGGCTG CACTGAAGGC CCTCGCTCCC ATTGGTGACA AACGTATGAG CGCTACGCCA TACGCCAATG GCGGCAAAGA TGCGCAAGCG CTGGTGATGC CGGATTTCAA AAACTATGCG GTAACCGTGA ATGCTCCTGG TGTTATTATT GCCGAAGGCA CACGTGAACT GGGAAAGATG CTACGCGATA TTTTCGAACT GAATGAACAG CAGCAAAACT TCCGTGTGTT CTGTCCTGAT GAAACGACTT CCAACAGACT GAACGCGGTG TTTGAAGTCA CTAAGCGCTG CTTTATGGAG CACCTGATTG ATATAGATGA TCATTTATCC CCTGATGGCA GGGTCATGGA AGTATTGAGC GAACATCTCT GTCAGGGCTG GCTGGAAGGT TATCTGCTGA CCGGCAGACA CGGTGTTTTC CCTTGTTATG AAGCCTTTAT CACCATTATC GACTCCATGT TTAATCAACA TGCAAAATGG TTGAAAACAT GCCGGGAAAT CCCCTGGAGA AAAGACCTTC CCTCGCTGAA TTACCTGCTG ACTTCTCATA GCTGGCGACA GGATCACAAT GGATATAGTC ATCAGGGACC AGGTTTTATT GATACCGTCG CCAATAAGAA AAGCAACGTT ATCCGTATCT ATCTGCCCCC TGACGCAAAC TGTCTGCTGT CTGTCATGGA TCACTGCCTG AAAAGCAGGA ACTATGTCAA TCTGGTGGTA GCAGGTAAGC AACCTGCCCT GCAATGGCTT AATGTGGAAG ACGCAGCGAA ACATTGCGCA CAGGGTGCTT CTGTGTGGGA ATGGGCCAGT AATGACAATG GTCAGCAACC TGATGTTGTA CTCGCCTGTG CCGGAGATGT GCCTACACTT GAAATTATCG CAGCAGCATG GTTACTTAGG AAGCATTTAC CTGACTTAAA AGTAAGAGTT GTGAATGTAG TGGACCTGAT GTCGCTCTCT CCGAAAGATT ACCATCCGCA TGGACTGGAG GCTGCATTAT TTACCTCACT TTTCACGGAC GATACACCCG TAGTATTTGC CTTTCATGGG TATGTAAGGA TTGTACATGA CCTCGTACAT GGACGGCCGC ATCCGGCAAG ATTCCACCTG AGAGGATTCA TGGAAGAAGG CACGACCACT ACCCCGTTTG ATATGGTCGT GCTCAATAAA ATGAGCCGCT TCCATCTGGC CATTGCCGCC ATCCAGCGGA CAGAAAGACA GCTGGAAAAA GCAGACGAAG TGATCGGCTA TTTTGAAGAT AAACTGAGTA TGCACAACAT CTACATCAGG GAATGCCTGG AAGATATGCC TGATATCAGT AACTGGAAAT GGAGTGATGA ATAA
|
Protein sequence | MATLTNEQVH NIQAYWEASN YLAAAQIYLQ DNPLLKDPLL TGHIKPRLLG HWGTSPGLNF IYVHLNRLIK SSDADILFIC GPGHGAPAVL AQTWLEGTYT ETYPEITQDE KGMRQFFRQF STPGGIPSHV SAHTPGSVHE GGELGYSLAH AAGAVMDNPH LIAACVVGDG EAETGPLAGS WKQNCFLNPA RDGAVLPILH LNGYKISGPT VMGRMPDDAL ATLFNGYGYA PLFVRAADTI GTHQEMAMAL DTAYERIRAI QQYARDGKKT DERTLWPLII LRSPKGWTGP VMWKGKPVEG TFRSHQVPLP DVREDQDQLA LLEQWLRSYT PEKHFTANGA PQAALKALAP IGDKRMSATP YANGGKDAQA LVMPDFKNYA VTVNAPGVII AEGTRELGKM LRDIFELNEQ QQNFRVFCPD ETTSNRLNAV FEVTKRCFME HLIDIDDHLS PDGRVMEVLS EHLCQGWLEG YLLTGRHGVF PCYEAFITII DSMFNQHAKW LKTCREIPWR KDLPSLNYLL TSHSWRQDHN GYSHQGPGFI DTVANKKSNV IRIYLPPDAN CLLSVMDHCL KSRNYVNLVV AGKQPALQWL NVEDAAKHCA QGASVWEWAS NDNGQQPDVV LACAGDVPTL EIIAAAWLLR KHLPDLKVRV VNVVDLMSLS PKDYHPHGLE AALFTSLFTD DTPVVFAFHG YVRIVHDLVH GRPHPARFHL RGFMEEGTTT TPFDMVVLNK MSRFHLAIAA IQRTERQLEK ADEVIGYFED KLSMHNIYIR ECLEDMPDIS NWKWSDE
|
| |