Gene Cpin_6386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6386 
Symbol 
ID8362570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8026565 
End bp8027749 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content49% 
IMG OID644968514 
Productacetate kinase 
Protein accessionYP_003125991 
Protein GI256425338 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA AAAATACCGT CATCTTAACC ATTAACTGCG GCTCTTCCAG TCTGAAATTT 
GCCTTGTTTG ATTACAGTTC CCTAGCACTG ATCAGCAAAG GAAATATACA GAACATCGGT
GCTGAGAGCA GCATTCATAT TGAAGACGCC GCCGGTCATG AAGAACGGGC TATGCAAGCG
GTGCCTGATC TGGAAACAGC GATACAATTA CTCACCGGAC TGCTGGAAGA CAGTTACGCA
CCTTATACGA TCCATGCGAT CGGGCACCGG ATTGTACAGG GCGGCAAAGA ACATTACTTA
CCCGAGTTAA TTACCCCCGC CCTCCTGGAT GCATTCGAAT CACTGATACC ACTCGCGCAG
GGCCACCTTC CGGCTGAAAT CACCGCCATA CGCGCCTTTG CATCCGCCTA TCCGGCGGTG
CCGCAGATAG CCTGTTTTGA TACCGCCTTT CACAAAGACA TGCCCTTCAC AGCAAAATAT
TTTGCCATTC CCCGTCACCT GTGGGAGGAT GGTATTATCA GATACGGTTT TCATGGCCTT
TCGTATGAGT ACATTTATCA ACAACTACAG CAATCGTCAC CACAGGAAGC CAGGGGAAAA
ATCATCATCG CGCATCTGGG CAACGGAGCC AGCATGGCCG CTATACGCGA TGGTAAAAGT
ATAGATACCA CTATGGGCCT GACGCCCACC GGCGGCCTCG TCATGAGTAC CCGCTCTGGT
GACCTCGATC CCGGTGTCAT ACTCTACTTA CTAAAAGAAA AACAATTCCT CAGCGAGAGG
GCTTTAAATG AGCTGCTCAA CAAACAATCA GGTCTAAAAG GCGTATCCGG CACCGTAGCT
GATATCCAGA CCCTGCTGGA AAAAGAAAAC ACCGATCCCA AAGCAGCAGA GGCAGTACAA
CTGTTCTGTT ATCAGGCGAA AAAATACATC GGTGCTTTAA CAGCAGCTAC AGAAGGTATA
GACACATTGA TATTTACCGG TGGCATCGGT TTACACGCCC CGCTGATAAG AGAAAGGATC
TGTGCCGGTC TCGGATACCT GGGTATACAA ACAGATGCGG CACTGAATAA TGATAACCGT
GACATCATCT CTCCGGAAGG CGCTCCGGTG AAAGTCAGGG TAATGGCTAC AAATGAAGAG
CTCATTATTG CACAACACAC ACAGCAATGT TTGCACACAC ATTAA
 
Protein sequence
MDKKNTVILT INCGSSSLKF ALFDYSSLAL ISKGNIQNIG AESSIHIEDA AGHEERAMQA 
VPDLETAIQL LTGLLEDSYA PYTIHAIGHR IVQGGKEHYL PELITPALLD AFESLIPLAQ
GHLPAEITAI RAFASAYPAV PQIACFDTAF HKDMPFTAKY FAIPRHLWED GIIRYGFHGL
SYEYIYQQLQ QSSPQEARGK IIIAHLGNGA SMAAIRDGKS IDTTMGLTPT GGLVMSTRSG
DLDPGVILYL LKEKQFLSER ALNELLNKQS GLKGVSGTVA DIQTLLEKEN TDPKAAEAVQ
LFCYQAKKYI GALTAATEGI DTLIFTGGIG LHAPLIRERI CAGLGYLGIQ TDAALNNDNR
DIISPEGAPV KVRVMATNEE LIIAQHTQQC LHTH