Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6280 |
Symbol | |
ID | 8362462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7914946 |
End bp | 7916127 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968407 |
Product | acyltransferase 3 |
Protein accession | YP_003125886 |
Protein GI | 256425233 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAG TATCCGCCCC TGGTAAACAC TTTACCGGAT TAGACCATTT GCGCGCCTTC GCAATCACCT TCGTATTTCT GTACCATTTC CGTATTTTCA AACATCCCGA CTGGATTGAT ACTATCGGCG GCTTCGGATG GACAGGCGTT GACCTGTTCT TCGTACTCAG CGGTTATCTG ATTTCTTCAC AACTGTTTGC GCAGATCAAC CGTCATGAAA CGATCTCCTT CCGGGAGTTT TTTCTCAAAC GTTTTTTCAG GATCATTCCG GCTTATCTGA CTGTCCTGGC ACTGTATGTT TTTCTGCCGG TATTCCGTGA GAAAGAAGCC ATGGCGCCGC TCTGGAAGTA TCTCACTTTT ACGCAGAATA TAGGTCTGCA CCTGAAAGAC CGCGGGACTT TCTCACATGC CTGGTCGCTT TGTATTGAGG AACAGTTCTA TTTTATCCTG CCCTTATTAC TGATCATGCT GGTGCGTTGG AAGGCACTGA AAGTAGGTCC CTGGCTGATA GGACTGATCT TTATCGGTGG ATTTGCCATC CGTCTTTTCT CCTGGCATAC GATTGTAGCA CCAGCATTGG AGAGAGATGA TGCATGGGTC ACCTGGTATA TGTGGATGTA CTATCCCACT TTTACCCGTC TCGATGGGCT GCTGACGGGC GTAGCTATAG CAGCGGTATT TGCTTTCCTG CCTGCTGTAA AAGAGAAGAT CACTTCCCTG GGTAATAAAT TGCTGCTGAT CGGATTGATC CTGCTCGTAA GTGCATGGTT CCTTTGTGAA GATCCTATGA GTTTTGGCGC TTCTATCTTC GGTTTCCCGC TGATCGCCCT GGGGTATGGT TGTATTGTTG CCGGCGCAGT CAGTGAAAGT AGTTTCCTGT ATAAAAGAAA ACTGGCTTTC ACCACTACAT TGGCGATGTT GTCATATGGT ATTTACCTTT CTCATAAAGG CATTATCCAT CTCACACAGT TAGCCTTAGA AAAGATGGGG ATAACGGCTG ACGGCAATCT CTCTTTTGTG ATCTGTATTG CAACATGTGT GTCGGCGGCA TTCCTCCTGA ATATCATGGT GGAAAAGCCT TTCCTCAAAT TGCGTGAGCG TGTCTTATCA AAACTCACTT CAGGTAAGGG CTCTGGAAAT CAAGTTTCTT CAGGCCGGCC TGTACTTCAG GACAACTCAT GA
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Protein sequence | MSQVSAPGKH FTGLDHLRAF AITFVFLYHF RIFKHPDWID TIGGFGWTGV DLFFVLSGYL ISSQLFAQIN RHETISFREF FLKRFFRIIP AYLTVLALYV FLPVFREKEA MAPLWKYLTF TQNIGLHLKD RGTFSHAWSL CIEEQFYFIL PLLLIMLVRW KALKVGPWLI GLIFIGGFAI RLFSWHTIVA PALERDDAWV TWYMWMYYPT FTRLDGLLTG VAIAAVFAFL PAVKEKITSL GNKLLLIGLI LLVSAWFLCE DPMSFGASIF GFPLIALGYG CIVAGAVSES SFLYKRKLAF TTTLAMLSYG IYLSHKGIIH LTQLALEKMG ITADGNLSFV ICIATCVSAA FLLNIMVEKP FLKLRERVLS KLTSGKGSGN QVSSGRPVLQ DNS
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