Gene Cpin_6280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6280 
Symbol 
ID8362462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7914946 
End bp7916127 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content47% 
IMG OID644968407 
Productacyltransferase 3 
Protein accessionYP_003125886 
Protein GI256425233 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG TATCCGCCCC TGGTAAACAC TTTACCGGAT TAGACCATTT GCGCGCCTTC 
GCAATCACCT TCGTATTTCT GTACCATTTC CGTATTTTCA AACATCCCGA CTGGATTGAT
ACTATCGGCG GCTTCGGATG GACAGGCGTT GACCTGTTCT TCGTACTCAG CGGTTATCTG
ATTTCTTCAC AACTGTTTGC GCAGATCAAC CGTCATGAAA CGATCTCCTT CCGGGAGTTT
TTTCTCAAAC GTTTTTTCAG GATCATTCCG GCTTATCTGA CTGTCCTGGC ACTGTATGTT
TTTCTGCCGG TATTCCGTGA GAAAGAAGCC ATGGCGCCGC TCTGGAAGTA TCTCACTTTT
ACGCAGAATA TAGGTCTGCA CCTGAAAGAC CGCGGGACTT TCTCACATGC CTGGTCGCTT
TGTATTGAGG AACAGTTCTA TTTTATCCTG CCCTTATTAC TGATCATGCT GGTGCGTTGG
AAGGCACTGA AAGTAGGTCC CTGGCTGATA GGACTGATCT TTATCGGTGG ATTTGCCATC
CGTCTTTTCT CCTGGCATAC GATTGTAGCA CCAGCATTGG AGAGAGATGA TGCATGGGTC
ACCTGGTATA TGTGGATGTA CTATCCCACT TTTACCCGTC TCGATGGGCT GCTGACGGGC
GTAGCTATAG CAGCGGTATT TGCTTTCCTG CCTGCTGTAA AAGAGAAGAT CACTTCCCTG
GGTAATAAAT TGCTGCTGAT CGGATTGATC CTGCTCGTAA GTGCATGGTT CCTTTGTGAA
GATCCTATGA GTTTTGGCGC TTCTATCTTC GGTTTCCCGC TGATCGCCCT GGGGTATGGT
TGTATTGTTG CCGGCGCAGT CAGTGAAAGT AGTTTCCTGT ATAAAAGAAA ACTGGCTTTC
ACCACTACAT TGGCGATGTT GTCATATGGT ATTTACCTTT CTCATAAAGG CATTATCCAT
CTCACACAGT TAGCCTTAGA AAAGATGGGG ATAACGGCTG ACGGCAATCT CTCTTTTGTG
ATCTGTATTG CAACATGTGT GTCGGCGGCA TTCCTCCTGA ATATCATGGT GGAAAAGCCT
TTCCTCAAAT TGCGTGAGCG TGTCTTATCA AAACTCACTT CAGGTAAGGG CTCTGGAAAT
CAAGTTTCTT CAGGCCGGCC TGTACTTCAG GACAACTCAT GA
 
Protein sequence
MSQVSAPGKH FTGLDHLRAF AITFVFLYHF RIFKHPDWID TIGGFGWTGV DLFFVLSGYL 
ISSQLFAQIN RHETISFREF FLKRFFRIIP AYLTVLALYV FLPVFREKEA MAPLWKYLTF
TQNIGLHLKD RGTFSHAWSL CIEEQFYFIL PLLLIMLVRW KALKVGPWLI GLIFIGGFAI
RLFSWHTIVA PALERDDAWV TWYMWMYYPT FTRLDGLLTG VAIAAVFAFL PAVKEKITSL
GNKLLLIGLI LLVSAWFLCE DPMSFGASIF GFPLIALGYG CIVAGAVSES SFLYKRKLAF
TTTLAMLSYG IYLSHKGIIH LTQLALEKMG ITADGNLSFV ICIATCVSAA FLLNIMVEKP
FLKLRERVLS KLTSGKGSGN QVSSGRPVLQ DNS