| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6251 |
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| Symbol | |
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| ID | 8362433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7875164 |
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| End bp | 7878043 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968379 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003125858 |
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| Protein GI | 256425205 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.971738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAAA CCATTACACA AGGCAGTAAC AATAAGAACA AAGTAACTCC CGTACTATTG
CTGGAGTTGC AATCCAATCA CCCCGAACCG GTGAAGATCA GTGCAGGGAT GTTGAAAGAA
GATGCGGCCG GACGTACCTG TCAGCGTGTG CCTCTGAGTG ATAAAAAATC ATTATCTATC
TTCAATACAC TGCCGGCAGG CGTACAACAC CTGCTGCAAC CCTGTACGCA GGAAGCTATG
GTCTACAAAG AACTACAGCT GAAAGAGAAG TTCCGCGACA ATCCCGTAAA AGAACTTACC
CAGCAGCAGT TTATACAGGA AGGCCTGCAA CAGTACCTCT ACCATACATT ACAGCAACTA
CGGCCACTAA CGCCCGTATT GCCCTGGTAT ACCATGATCA CGGACGATAG TATGCTCATG
AAACATACGC GTCCGGTAAC AGTCAGCAAC TTCACCCCTA TCCTCTCCTT CGAACTGAAA
CGTACGACTA CCGGCGCTTT GCGCATGGTG GCCATCGTCA CTATCAACGG ACAGGTAGCG
CCACTCTCCG GTTTTGAACA TTACGGATTC CTGCTACGCA GAGAAGGTGA ATTGTTTATC
CTCGCTCCCG CTGCCGCCGC TATACTGGAA CAATTTCCTG CCGGCGTAAA AGAAATCCCT
GCTGCAGAAG AAACCACATT CATCCAGGAG GTACTGCCTG CTTTAAGTGA ACAATACACC
GTGGACAAAA GCATCCTCTT ACAAAAAGAA GTCATCGATA CAGCACCGGA ATGCAACATC
TGGCTGAGTG AACTGAATAA GTCTTTTCTC GTACTGACTC CGCAATGGCA ATACGGCAAT
TTCTCCATTG AAGACAGCAG CGAACCTGTG GTACTCCGGG CAGAAGGCGA TATACAGTAC
GAGATACGGC GACACATGGA GGCAGAAAAA GAAATGATCG CCTTCATCCG TAGTCTGCAT
ACACGTTTTG CACAACAGCG TAACGGTTAT TTCTATCTGC CTTTCGCAGA CGCAGAGAAA
AGCCAGTGGC TCGTTAAATG CTATCGCAAG CTGACAGATA AGAACATTGG CGTATACGGC
ATGGATCAGC TGAAGCACTT CCGTTATAAC ACCAATATAC CTGTAATGGA TGTGCGCTGG
CACAGTGATG ATAAAGATAC TTTCGATCTT GAAATAGATA TACACTACGG CGATATTCCC
GTTGCCCTCA CCGATATACA AAAAGCCTTA CAACACCGGC AACCACACCT CTTACTGAAA
GACGGAACCA TCGGTGTCAT CCCCGATGAA TGGCTGCATA AACATGATCT GCTGTGGAAA
CTCGGACAGG TCAATAAAGA CAGACTGAAA TTATCACGCC TGCATTTTAC TGTCGCCCAG
GAAATGCTGG AAAACAGAGA AACGCCGGTA CAGGAAAATA CACTGGAGAA ACTACGCCGT
TTACAGGCAC ACTCCGCCGG ACAATTCCCT GTCCCTACAG CCGTACAGGC CACACTTCGT
AATTATCAGC AGGCAGGATT TGAGTGGATG TGTTTGCTGG ATGCAATGCG CTGGGGTGGC
TGCCTGGCAG ATGATATGGG TCTTGGTAAA ACCTTACAGA CCATCACCTT TTTGCAACAC
CTCGCAGAAA AATACCCGGG CGAAACACAC CTGGTGATAT GTCCAACCTC ATTGATCTAT
AACTGGCAGG CCGAATTGCA GAAATTTGCA CCCGGTTTGC GCTACACGGT GTACCATGGT
GGTAACAGAC AATATGACGC CGCTGCCTGG AAACAACAAC AACTGATCAT CACCAGTTAT
GGTACCGTGC GTAGTGATGC CGCAATCTTC AACAATCATA TATTCGGTTA TGTCGTACTG
GATGAAAGTC AGGTGATCAA GAATCCTTCT TCACAAACGA CCAAAGCACT ACAGGTACTG
CAATGCCGCA ACAGACTTAT ATTGAGCGGT ACTCCTATCC AGAATAACAC CATGGATCTT
TATGCGCAAA TGAACTTTGC GAATCCCGGA CTGTTAGGTA ATCAGGCGTT CTTTAAGTCA
GAATTTGCCA TGCCGATTGA CAAATATGCC GACGCAGAAA AGGCAGGCCG GCTGCGCAGA
TTAATCTATC CCTTCCTGCT GCGACGTACC AAAGAACAAA TTGCACAGGA TTTGCCGGAT
AAGACTGAGA TCATTATGTG GTGTGAGATG GGCGAAGAAC AGCGGAAATC GTACAACCGC
ATACGCGATA TGTACAAGGA AAAGCTGCTC AAACAGATCA ACGAATCGGG AATGGCTGCC
AGTACTATTT ACGTACTGGA AGGTCTGACC CGGCTACGAC AGATCTGTAA TGCGCCGCAA
TTAGTGGAAC AGGAATCGCA TGTAACCAGT TCTGTCAAAC TGGATGAACT GATGCGCGAA
ATCAGTGAGA ATACCGGCGC ACATAAAGTA CTGGTCTTTT CACAATTCAC CGGCATGTTA
CAGCTGATCG CGAAATCCAT GGAAGGTGAA GGTCTTCCCT TCCTCTACCT GGATGGCAGC
ACCAAAGCTG AGAACAGACA ACAACTGGTG CAGCAATTCC AGACAGACGA GCAGGTGAGG
GTGTTTCTGA TCAGTCTGAA AGCAGGGGGT GTCGGATTGA CATTAACCGC CGCTGATTAT
GTCTACCTCG TAGACCCATG GTGGAACCCG GCAGCAGAAC AACAGGCGAT TGACCGTACC
CACCGTATCG GTCAGCAGAA TAAAGTTTTT GCCTATAAAA TGATCTGTAA AGACAGTGTC
GAAGAAAAAA TACTGGCACT CCAGGAAAGA AAGAAAATGA TTGCCGATGA CCTGATCAGT
GAGGATACCG GCTTCGTGAA AAAGCTGACA GAAGACGATG TTGCTTTCCT GTTCAGTTAA
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| Protein sequence | MGKTITQGSN NKNKVTPVLL LELQSNHPEP VKISAGMLKE DAAGRTCQRV PLSDKKSLSI
FNTLPAGVQH LLQPCTQEAM VYKELQLKEK FRDNPVKELT QQQFIQEGLQ QYLYHTLQQL
RPLTPVLPWY TMITDDSMLM KHTRPVTVSN FTPILSFELK RTTTGALRMV AIVTINGQVA
PLSGFEHYGF LLRREGELFI LAPAAAAILE QFPAGVKEIP AAEETTFIQE VLPALSEQYT
VDKSILLQKE VIDTAPECNI WLSELNKSFL VLTPQWQYGN FSIEDSSEPV VLRAEGDIQY
EIRRHMEAEK EMIAFIRSLH TRFAQQRNGY FYLPFADAEK SQWLVKCYRK LTDKNIGVYG
MDQLKHFRYN TNIPVMDVRW HSDDKDTFDL EIDIHYGDIP VALTDIQKAL QHRQPHLLLK
DGTIGVIPDE WLHKHDLLWK LGQVNKDRLK LSRLHFTVAQ EMLENRETPV QENTLEKLRR
LQAHSAGQFP VPTAVQATLR NYQQAGFEWM CLLDAMRWGG CLADDMGLGK TLQTITFLQH
LAEKYPGETH LVICPTSLIY NWQAELQKFA PGLRYTVYHG GNRQYDAAAW KQQQLIITSY
GTVRSDAAIF NNHIFGYVVL DESQVIKNPS SQTTKALQVL QCRNRLILSG TPIQNNTMDL
YAQMNFANPG LLGNQAFFKS EFAMPIDKYA DAEKAGRLRR LIYPFLLRRT KEQIAQDLPD
KTEIIMWCEM GEEQRKSYNR IRDMYKEKLL KQINESGMAA STIYVLEGLT RLRQICNAPQ
LVEQESHVTS SVKLDELMRE ISENTGAHKV LVFSQFTGML QLIAKSMEGE GLPFLYLDGS
TKAENRQQLV QQFQTDEQVR VFLISLKAGG VGLTLTAADY VYLVDPWWNP AAEQQAIDRT
HRIGQQNKVF AYKMICKDSV EEKILALQER KKMIADDLIS EDTGFVKKLT EDDVAFLFS
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