Gene Cpin_6224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6224 
Symbol 
ID8362406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7848361 
End bp7848993 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID644968352 
ProductWbqC-like family protein 
Protein accessionYP_003125831 
Protein GI256425178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTG ATGCACACAA GAAGACACTA CTCATTGAAA CACAGTATTT TCCAAATATT 
TCCTTTTACA AAACTTTAAT TAACTACGAT CATCTGCTCC TGGAAAAGTT TGAACACTAC
CAGAAGTTAA GTTATCGTAA CCGTTGTTAT ATCGCCGGAC CGAACGGACG CATTTTATTA
AGCGTTCCAT TATCCCGTGG AAAGAATCAG CGGACGGTAA CGAAGGATGT AAGGATCAGC
AATGATGAGC GTTGGCAGGC GTTGCACTGG AAAACCCTTG TGTCTGCTTA CCGTCGTTCT
CCATGGTTTG AATATTATGA GGACGAAATG GGCCTTTTGT ATGAAAAACC GGTATCATTT
CTGCTGGACT GGAATATGCT TTGCTTTGAG TGGGCCAACA AGATCATTGG CGTGAATACG
CCGGTTAGTT TTACAGATGA ATATCATAAG ACATATGAGG TGGCTGGCAT AAACGATATG
AGGGATATCA TCCGGCCGGA AGAGAAGGAA GTGGAGGAAG ACACGGTTCG GTATACCCAG
GTATTCCAGG ACCGCGTTGG TTTCCTGCCT GATCTGAGCA TTCTGGACCT GATTTTCTGT
GAGGGAAAAC GTAGCCTGGA GCTAATTAAA TAG
 
Protein sequence
MAADAHKKTL LIETQYFPNI SFYKTLINYD HLLLEKFEHY QKLSYRNRCY IAGPNGRILL 
SVPLSRGKNQ RTVTKDVRIS NDERWQALHW KTLVSAYRRS PWFEYYEDEM GLLYEKPVSF
LLDWNMLCFE WANKIIGVNT PVSFTDEYHK TYEVAGINDM RDIIRPEEKE VEEDTVRYTQ
VFQDRVGFLP DLSILDLIFC EGKRSLELIK