| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6220 |
|---|
| Symbol | |
|---|
| ID | 8362402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7844285 |
|---|
| End bp | 7844698 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644968348 |
|---|
| Product | protein of unknown function DUF1094 |
|---|
| Protein accession | YP_003125827 |
|---|
| Protein GI | 256425174 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCAG CAGAACTAGT AATGCCCATG AAGGCAGAAT TGACAGATAA TGGTTTTCAA
GAACTGCTTA CACCTGAGAA AGTGGATGAG ATATTAAAGC AAGAGGGAAC AACCCTTGTG
ATGATCAATT CAGTTTGCGG TTGCTCTGCA GGTAGTGCAC GTCCTGGTGT GCTGATGGCC
GTTGCGCACA GTGAAAAGAA ACCAGACAGA TTAACAACCA GCTTTGCGGG TTTTGATCTG
GCAGCGGTTC AGCAGCTTCG TTCTCACCTG TTACCTTATC CTCCGTCTTC TCCTGCGATC
GCTTTATTTA AAGATGGTCA GCTGGTGCAT TTTATTGAGC GTCACATGAT TGAAGGTCGT
CCTGCACAGA TGATTGCAGC GAACCTGGCT GACGCGTTTG CGCAATACTG CTAA
|
|---|
| Protein sequence | MYPAELVMPM KAELTDNGFQ ELLTPEKVDE ILKQEGTTLV MINSVCGCSA GSARPGVLMA
VAHSEKKPDR LTTSFAGFDL AAVQQLRSHL LPYPPSSPAI ALFKDGQLVH FIERHMIEGR
PAQMIAANLA DAFAQYC
|
|---|
| |