| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6182 |
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| Symbol | |
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| ID | 8362364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7799092 |
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| End bp | 7799907 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968310 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125789 |
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| Protein GI | 256425136 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0362247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAGTATTTAT CACCGGCGCC TCTTCCGGTT TTGGCAAAGA AACAGTGCTA
AAGTTTCATA ACGAAGGCTG GAACGTAATA GCAACAATGC GCAACCCTGA AAAATATACC
GAATTGTCAG CGCTCGAGAA TGTGTGGATC ACCCAACTGG ACGTTACAGA TAAGGCGGGT
ATTACACAGG CAGTTGCCCG CGGACTCGAA AAATTTGGCC GTATCGACGT ACTCGTCAAT
AACGCTGGTT ATGGTGCTAT AGGATCAATT GAAGCAGCTT CAGATGAAAT CATCCGTCGC
CAGTTTGAAG TCAACCTTTT CGGCGTAATC GATGTTACCA AGGCAGTATT ACCCGCCATG
CGCAAACAGC AGGAAGGTGT CGTCATCAAT ATCTCTTCCA TGGGTGGCCG TATTACCATT
CCTTTCGGCG CACTGTACAA TGCAACTAAA TTCGCCCTGG AAGGACTGAC AGAAGCTATG
CAATATGAAC TGAACCCGCT CGGTATAAAA CTCAAACTTA TTGAGCCCGG CAGCTATCGC
ACAAACTTCA ATGGCAGTTC GATGGACTTC TTCGGCGCAG GTGATATTGC AGACTATCAG
CCTTTCTTTG AGAAATTTAC CGCCATCGCT AAAAGCCCCG GCAGAGGTAA TGCCAATATC
ACAGAAGTCA GCGATGCCAT CTACCTGGCA GCAACAGATA ATACGGAACA GTTACGCTAT
GTGGTAGGCG CCGATGCGGC GAATATGATT AACTACAAAC TGGAAAAAGG AGATGTGGCC
TTTAAACAGT TGGTATCCGG ACACTTTGGT ATATAA
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| Protein sequence | MKKTVFITGA SSGFGKETVL KFHNEGWNVI ATMRNPEKYT ELSALENVWI TQLDVTDKAG
ITQAVARGLE KFGRIDVLVN NAGYGAIGSI EAASDEIIRR QFEVNLFGVI DVTKAVLPAM
RKQQEGVVIN ISSMGGRITI PFGALYNATK FALEGLTEAM QYELNPLGIK LKLIEPGSYR
TNFNGSSMDF FGAGDIADYQ PFFEKFTAIA KSPGRGNANI TEVSDAIYLA ATDNTEQLRY
VVGADAANMI NYKLEKGDVA FKQLVSGHFG I
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