Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6162 |
Symbol | |
ID | 8362344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7770986 |
End bp | 7772287 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968292 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_003125771 |
Protein GI | 256425118 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0270594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGG GATTAGTATT TATGATGTTA TTGCTGTTGA CACACAGCAT CTTTGCCCAA CAGGCACAAC ACGTGGTTTT GATCACAATT GACGGCTTCC GTCCTAACTT TTATATGGAT AGCACCTGGA AGACACCGCA TCTGCGTGAA ATAGCTAAAA ACGGCGTTTA TGCGAAAGGT GTTAACAGTG TGTTTCCTTC TATGACCTAT CCTTCACATA CTTCGATTGT TACAGGCGTA TGGCCGGTAA AACATGGTAT TTACTACAAC AATCAATTCA ATCCGAATGG CCCTTCCAAT GAGCCGTACT GGCAGGACAG TTCCATCAAA GTACCTACCG TATGGAGCGT TGCACAACAA AAAGGACTGA AAGTAGCGGC ACTCCTCTGG CCGGTATCCG CCAATGCACC TGTGATGTAT AATATTCCTG ATATCGGCGG ACTGGGCGAC AGTGTGCGTG AGGTGTATTC AAAGCCAGCC GGCTTTATCG CTGATCTGAA AAAGAATGTA TTTGATAATA CCGACCGCAT CGAATGGGGA AAAGATCATA ACATCGCTAA GATCGCTTCT TATGTGATCA AAAAAGATCA GCCTAACCTG ATGACCATCC ACTTCTTTTC TGTGGATCAT TATCAACATG AACAGGGTCG TGAAGGCGAC AAAGTACGCG CTGCCATCGC TGATGCAGAC AGCAGTGTAG GGATCATTAT CGATGCGCTG AAAGAAGCAG GTATCTGGGA AAACACAGTA CTCATCGTTA CCGGCGACCA CGGTTTCCTG GATGTAAAAA CAAGTGTAAA CCCCAATGTA TGGCTGGCCA AAGCAGGACT GATCAATGAT GTAAAAACAA ACGACTGGAA AGCGCAATTC TGCTCAGTGG GCGGTTCCAG CTACCTGTAC CTGAAAGACA AAAACGATAC AAAAACACTG AAACAGGTGA CCGATCTGCT GGCGGGATTA TCTCCGGAAG AGAAAAAGCT GTTTCGTATC ATTGATCGCA AACAGATCGA TAAAGTAGGC GGCAACCCGG AAGTGGGATT AGCGCTGAGC GGAGAAAACG GCGCTTCTTT CGGGAATGCA GTGAAAGGCG ATGCTGTGAA ACCAGGCCAT GGCGGTTCAC ATGGTTACTA TCCTGATTTC CAGGAAATAC GTACCGGCTT TGTAGCCTGT GGAGCAGGTA TAAAAAAAGG TGGAATGATT GCCGGGATGA ATCTGAGAGA TATTACGCCT GCATTGGCGA AATTACTACA GCTGTCAATG AAGACGGACG GTAATATACC AGCGAATCTG CTGGAGAAAT AA
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Protein sequence | MKKGLVFMML LLLTHSIFAQ QAQHVVLITI DGFRPNFYMD STWKTPHLRE IAKNGVYAKG VNSVFPSMTY PSHTSIVTGV WPVKHGIYYN NQFNPNGPSN EPYWQDSSIK VPTVWSVAQQ KGLKVAALLW PVSANAPVMY NIPDIGGLGD SVREVYSKPA GFIADLKKNV FDNTDRIEWG KDHNIAKIAS YVIKKDQPNL MTIHFFSVDH YQHEQGREGD KVRAAIADAD SSVGIIIDAL KEAGIWENTV LIVTGDHGFL DVKTSVNPNV WLAKAGLIND VKTNDWKAQF CSVGGSSYLY LKDKNDTKTL KQVTDLLAGL SPEEKKLFRI IDRKQIDKVG GNPEVGLALS GENGASFGNA VKGDAVKPGH GGSHGYYPDF QEIRTGFVAC GAGIKKGGMI AGMNLRDITP ALAKLLQLSM KTDGNIPANL LEK
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