| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6126 |
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| Symbol | |
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| ID | 8362308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7724484 |
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| End bp | 7727252 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968257 |
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| Product | 2-oxoglutarate dehydrogenase, E1 subunit |
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| Protein accession | YP_003125736 |
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| Protein GI | 256425083 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGTT TTACATATCT TAATGACGGG AATGCAACAT ATATCAATAC ACTCTACGAC
ACATACAGAC ATGATCCCGC ATCAGTAGAG TCTGGATGGC GTAAGTTTTT TGAAGGGTTT
GATCTCGGCT TCTCCCGGGA AGCCACAAAT ATCTCCGATA CAGTAGCTAG TCCGTCTGTC
AATCCGGCAA TATCTTCCAA TGAAATAAAA GTGCTTCAGC TTATTGAAGA CTATCGTAAC
AGAGGGCATC TGTTTTCGAA AACCAATCCT GTAAGAGAAC GAAGAAAACA TCTCCCAGGA
AAAGAACTGA CATCTTTCGG CCTGGCCGAC AGTGATCTGG ACACAGTTTT TAATGCTGGA
AATGAGCTTG GTCTCAGGCC AGGCACATTA AGACAGATCC GCCGGTTACT GGAGGAAGTC
TACTGTGGAT CTACCGGCAT AGAATATAAG TACCTCAATG ATCCTGTAAG GGTAAAGTGG
TTTCAGGCGA GGATTGAAAT CCCCGGAAAT AAACCTCCAT TCTCATCAAC AGAGAAAAAG
CGCATTCTCT GCAAACTAAA TCAGGCTGTT GTATTTGAGA GCTTCCTGGC AACAAAATTT
ATCGGACAAA AGCGTTTCTC CCTGGAAGGT GCAGAAGGGC TCATTCCTGC AATGGATCTC
CTTATTCAAA AGTGCGCCAG CAATGGTGTA GAGGAAATCG TTATCGGAAT GGGACACCGC
GGCCGGTTAA ATGTGCTGGC AAATTTGATG GAGAAACCAT ACGAAGCAAT CTTCAGGGAA
TTTCTGGGCA AGAAAAATGA GCAGGACACC ATGATAAGTG GTGATGTGAA ATACCATCTG
GGATATTCGA ATGATGTAGC CACATCAGAT GGAAAAACAG TGCATCTCAG CCTGAGCCCC
AATCCCTCCC ATCTTGAAGC TGTCAATGCC GTTGTGGAAG GTATGACCCG CTCTAAAGCT
GACTACAAAT ATAATGGCGA CCATTCAAAG ATCTTACCGA TACTTTTACA TGGTGATGCC
TCCATTACCG GTCAGGGAGT CGTGTATGAA GTATTACAGA TGGAAAAGCT GAAGGGATAT
CATACAGGCG GCACTATTCA TCTGGTTATT AATAATCAGG TAGGTTTTAC AACAGACTAT
AAAGACAGCC GTTCGAGTAT CTATTGTACA GATCTGGCTA AAATAACCGG AGCACCGGTT
TTTCATGTGA ATGGAGACGA TGCGGAAGCT TTGGTACATG TAACCAGATT GGCGCTGGAC
TATCGTCAGA CCTTTCACGG GGATGTATTC ATTGACATTC TATGTTATAG AAAATATGGA
CACAATGAAT CAGATGAACC AAAATTTACA CAGCCGGTTT TATATAAAGC AATTGATCAA
CATCCTAATC CACGGGATAT TTATATCCGG CAACTCATTG CTGAAAAAAG TATCGATGTA
ACACTTCCCG GTGAAATCGA GACTTCTTTC AGAAAGCAGC TACAAGCGTC ACTGGACGAA
GCCAGGCAGG ATGGCAACAC GCCTTCTGCG TCATCCGCTT TCCAGGGGGT ATGGCAAGGT
CTGCGCAGGG CAAAGGACAA AGATTTCAGT CAGTCGCCTG ATACAGCTAT AACGGAAGCA
TCCTTACTGC GTATCGGCAA TGGCATCACC ACATTACCGA AGGGAAAAAT ATTCTTAAAA
AAAGTTGAGA AACTGTTCGA GCACCGGCAT AAGATGGTCA ATGAGACAAA GGTTTTTGAT
TGGGCAATGG CCGAATTATT AGCCTATGGT TCTTTGTTAC AGGAAAACCA TACCGTTCGT
TTGACGGGTG AGGACGTAAA GCGGGGAACA TTCTCACATC GACATGCAAC AGTAACAGAT
ACCGAATCAG AAGAAGAGAT CATACCACTC AATTGCCTGG GAACTACAAC AAAATTTGAT
ATCCATAATT CATTACTATC CGAATACGGT GTACTGGGAT TTGAATACGG GTATGCATCT
GCCAATCCGC ATGCGTTGGT CTTATGGGAA GCGCAATTCG GCGACTTTCT CAATACCGGA
CAGGTAATAG TTGACCAATA TATTGCCAGT GCTGAAACGA AATGGCAATT GGGCAACGGA
CTTGTCATGC TACTACCACA TGGTCATGAA GGACAGGGGC CAGAGCACAC TTCGGCCAGA
ATTGAACGCT TCCTGGAACT CTGTGCTAAT AACAATATCC AATTAGTTAA TTGTACAACT
CCTGCCAATT TCTTCCACGT ACTACGCCGT CAGTTAAAAC GTGACTTTCG TATCCCGCTG
ATAATTTTCA CGCCTAAAAG TCTTTTAAGG CATCCGCTGT GTGTCTCCCC GGTCAGTGCA
TTTACAACCG GAAGATTCCA GGAACTGATT GATGACACAC ATGCAAGCGG CCAGGATGTA
AAACGTGTAT TGTTCTGCTC AGGAAAGATC TACTACGATC TGTTTCAAAA GCGTCAGGAG
ACCGGGCGTA ATGATGTGGC GATCGTTCGT ATTGAGCAGT TATATCCGAT GCCATTTACA
CAGATGCAAA GTATCAGGGA CAAATATACT GACGCAAAGG AATTTATCTG GGTACAGGAA
GAACCTGAAA ATATGGGCCC CTGGCCTTAT CTCTGCCGTA AATTCTATAA ACATCATATG
CAGCTGCATG TTATTTCCAG GCCTGAATCA GGCAGCACGG CAACGGGTTA CGCAATGCGG
CATGCCAATG AACAGGAAAC TCTTCTCAAC CGGGCCTTTG AAAAAGATGT TAATAACTAC
AATAAATAA
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| Protein sequence | MDRFTYLNDG NATYINTLYD TYRHDPASVE SGWRKFFEGF DLGFSREATN ISDTVASPSV
NPAISSNEIK VLQLIEDYRN RGHLFSKTNP VRERRKHLPG KELTSFGLAD SDLDTVFNAG
NELGLRPGTL RQIRRLLEEV YCGSTGIEYK YLNDPVRVKW FQARIEIPGN KPPFSSTEKK
RILCKLNQAV VFESFLATKF IGQKRFSLEG AEGLIPAMDL LIQKCASNGV EEIVIGMGHR
GRLNVLANLM EKPYEAIFRE FLGKKNEQDT MISGDVKYHL GYSNDVATSD GKTVHLSLSP
NPSHLEAVNA VVEGMTRSKA DYKYNGDHSK ILPILLHGDA SITGQGVVYE VLQMEKLKGY
HTGGTIHLVI NNQVGFTTDY KDSRSSIYCT DLAKITGAPV FHVNGDDAEA LVHVTRLALD
YRQTFHGDVF IDILCYRKYG HNESDEPKFT QPVLYKAIDQ HPNPRDIYIR QLIAEKSIDV
TLPGEIETSF RKQLQASLDE ARQDGNTPSA SSAFQGVWQG LRRAKDKDFS QSPDTAITEA
SLLRIGNGIT TLPKGKIFLK KVEKLFEHRH KMVNETKVFD WAMAELLAYG SLLQENHTVR
LTGEDVKRGT FSHRHATVTD TESEEEIIPL NCLGTTTKFD IHNSLLSEYG VLGFEYGYAS
ANPHALVLWE AQFGDFLNTG QVIVDQYIAS AETKWQLGNG LVMLLPHGHE GQGPEHTSAR
IERFLELCAN NNIQLVNCTT PANFFHVLRR QLKRDFRIPL IIFTPKSLLR HPLCVSPVSA
FTTGRFQELI DDTHASGQDV KRVLFCSGKI YYDLFQKRQE TGRNDVAIVR IEQLYPMPFT
QMQSIRDKYT DAKEFIWVQE EPENMGPWPY LCRKFYKHHM QLHVISRPES GSTATGYAMR
HANEQETLLN RAFEKDVNNY NK
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