Gene Cpin_6109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6109 
Symbol 
ID8362291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7709755 
End bp7710477 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID644968240 
Productglutamine amidotransferase 
Protein accessionYP_003125719 
Protein GI256425066 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATAC ACTTTGTGAT TCACGAAGTA TTTGAAGGAC CGGGGGCATT TATCGACTGG 
GCAAAAAACA GGGGACACTC CATCGGCTAT TCCAGTGTTT ATGCCGGGGA GACCTTACCT
GATACCATAG ACAGGATTGA TCTGCTGGTA GTGATGGGAG GACCGCAAAG TCCGGGCACG
ACAACATTAG AATGTCCTTA TTTTGATGCG GAAGCGGAGA TGACACTGAT CAGGAATTGT
ATCAATGCAG GTAAAGCAGT GGTGGGAGTT TGCCTGGGAG CACAGTTGAT CGGACAAGCA
TTAGGCGCTG CCGTTGAGCA AAGTCCGCAG AAAGAAATCG GCGTATTTCC CATTCAGCTG
ACAGCAGCCG GTAAGCACGA TAGCAAATCT GCACATATCC CGGTGGGTTG TGAAGTAGGA
CACTGGCATA ATGATATGCC GGGGCTGACA CCCGAAAGCA AAGTGCTGGC CTATAGTGAT
GGTTGTCCGC GACAGATAAT AGCCTATACG GAGCTGGTGT ATGGCTTACA ATGTCATATG
GAGTTTAACA CCGCGCTGAT AGAATTGCTG ATCAAACATG CCGGAGAGGA GTTGTTGAAT
AAAGGCCGGC ATCTCTTCGT ACAGGATGCG GAGACCTTAC GTGCATATGA CTTTACCGCG
ATGAACAAAC AACTGTTCAC TTTCCTGGAT GCCTTAACAA GTGGCTATAC AAATCAACAA
TAG
 
Protein sequence
MHIHFVIHEV FEGPGAFIDW AKNRGHSIGY SSVYAGETLP DTIDRIDLLV VMGGPQSPGT 
TTLECPYFDA EAEMTLIRNC INAGKAVVGV CLGAQLIGQA LGAAVEQSPQ KEIGVFPIQL
TAAGKHDSKS AHIPVGCEVG HWHNDMPGLT PESKVLAYSD GCPRQIIAYT ELVYGLQCHM
EFNTALIELL IKHAGEELLN KGRHLFVQDA ETLRAYDFTA MNKQLFTFLD ALTSGYTNQQ