Gene Cpin_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6088 
Symbol 
ID8362270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7688754 
End bp7690361 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content45% 
IMG OID644968219 
Producthypothetical protein 
Protein accessionYP_003125698 
Protein GI256425045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TCAGTGTACT ATTCAACATA CTGAAAACCA TCTCCGTATC TTTATTGATC 
ATGCTACCAT TTACAGCGGG GTCACAATCG ATGCCGATTT ATTTGCAGAA TCCATCATTC
GAAGGACAAC CTACAATGAA TGGTATACCA GCACCCTGGT ACCAACGTTC TGTAAATCTG
ATAGCATACA CACTACCGCT TGGATCGAAC AATGAGATAC CCCCTTCAGA TGGTAAGACA
TATGCCGCTT TGCTCGCAGC ATCAGAGAAT AATACATCTG CCGGTCATGC TGTATGGACT
TCTATCGGAC AACAATTATC ACATCCCATC GAAGCAGGTA AAGCCTATCT CATATCTTTT
GATATGGCCT TGATGCCCGA AGATGATAAG AGTGATCAGA CAGCTGCTAC CTCTACTGCT
TTAGCAATAC TGGGCTCCAG TTCTGAACAG GATATAGGAG AACGCATCTG GTACTCAGGT
ATTTACTACG ACAGAAAATG GGGAAGAATC ACAGCTGTAC TGAAACCGAA AAAGACATAC
GCACATCTTC GCTTTGAACC TTACGTAACT GACTATGACG ACACTTGTTA TGTCGTCACA
TTCCTCGACA ATATCTCCAT GATCGAAGAA ACACTCAACT TCGATACCTA TGCAGAGAAT
ACCTGTTATG GACACAGTCA GGGGAAGGTA TCAGTACAGA TGCATACCAT GGATAAAGAC
AATTACGTAT TTCGCTGGAT GCCCGGAGGT TATACAACAC CGGAAGTCTC TCAGCTACCG
GCAGGCAAAT ACACGGTGAC CGTCACCAAT ACCACGAAAG GTAATTCCAG GTCGGAAACC
GTAGAGGTCA AACAATGGGA TATCAACATC AATCCCATCG TAACACCTAT CAGTTGTAAC
GGAGAATCGG ATGCCGCTAT CAATGCAAAT GCAAGTGGTA GTAAAGCGCC TTATAAATAT
GCCCTGGTCA ACCAGTTTCC TGAACAGGAT TCCCCTGTAT TCAGTAACCT GCGCGCCAAT
TATTATACAC TGCAGGTAAC CGATAGTATG GGTTGTAATA AGATGCAGAG CATCAACATC
CCTAACCCTC TGGTACTCCA GGTAAAAGAC GCCAGTACGA AGTCGCTTTC CTGCAGCAGC
GTAAGAGACG GTCAGATCAT TATCACCATG AGCGGTGGTA CTACGCCTTA TCATTACAGC
ATATCTGATA CAGCTACGCA ACTGGAAAAC CGCTTCCGTC GACTGGACGC TGGTAGTTAT
CATTACAAAG TTGCCGATGA CCATAATTGT ACTGTTGAAG GCAATATTAC AGTAGAAAGA
GGGATGAATG ATTGTGCAGT GTATATGCCT TCCGCATTCA GTCCGAATGG CGATGGTAAA
AACGATCTGT TCAAAGCACG TGTACAGGAC GACGTCACCG ACTTCCGCCT GAGCATCTTC
GGCAGATGGG GACAACTCGT ATACGAGAGC AGTGATCCGG AAGCCGGGTG GAATGGTAAA
ATGCGCGGCG CTGATCTGCC ATCAGGCACC TATATCTGGA GTGTGATCTA CACAGATAGT
AAGAAGCAAC CCATGAAACA ACAAGGTACC GTAACCATGT TTAAATAA
 
Protein sequence
MKTFSVLFNI LKTISVSLLI MLPFTAGSQS MPIYLQNPSF EGQPTMNGIP APWYQRSVNL 
IAYTLPLGSN NEIPPSDGKT YAALLAASEN NTSAGHAVWT SIGQQLSHPI EAGKAYLISF
DMALMPEDDK SDQTAATSTA LAILGSSSEQ DIGERIWYSG IYYDRKWGRI TAVLKPKKTY
AHLRFEPYVT DYDDTCYVVT FLDNISMIEE TLNFDTYAEN TCYGHSQGKV SVQMHTMDKD
NYVFRWMPGG YTTPEVSQLP AGKYTVTVTN TTKGNSRSET VEVKQWDINI NPIVTPISCN
GESDAAINAN ASGSKAPYKY ALVNQFPEQD SPVFSNLRAN YYTLQVTDSM GCNKMQSINI
PNPLVLQVKD ASTKSLSCSS VRDGQIIITM SGGTTPYHYS ISDTATQLEN RFRRLDAGSY
HYKVADDHNC TVEGNITVER GMNDCAVYMP SAFSPNGDGK NDLFKARVQD DVTDFRLSIF
GRWGQLVYES SDPEAGWNGK MRGADLPSGT YIWSVIYTDS KKQPMKQQGT VTMFK