Gene Cpin_6030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6030 
Symbol 
ID8362212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7629846 
End bp7630301 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content47% 
IMG OID644968164 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_003125643 
Protein GI256424990 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00160885 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TTGTACGACT CACCAAGATA TTCAGGTTTG AGATGGCGCA TGCGCTTTCC 
GGTTATAAAG GACTTTGCAG GCATATTCAC GGACATTCCT ATCAACTGGA AGTGACGATC
AAGGGGCAGC CGGATAATAC GCCAGGGCGC AGCAGTGAAG GTATGGTGTT GGATTTTGGT
GATCTGAAAG CGATTGTGCA AGAGGAAATT ATTGCGCCGC TGGATCATGC GTTGATGTTA
AAAGAAGGAA GTGTATTGTC TCTGGGTGGA GTGGATAATG AATTGTTTGC CCGGATTGTA
TGGACACCCT GGCAACCGAC CTGTGAGAAT ATGGTGCTGG ATTTCGCCGG ACGTATTATT
GCGCAGCTGC CGGACGGGGT AACCCTTTGC AGGCTAAAGT TATATGAGAC GCATACTTCA
TATGCCGAAT GGTATGCCAG TGATAATATT GATTGA
 
Protein sequence
MKQIVRLTKI FRFEMAHALS GYKGLCRHIH GHSYQLEVTI KGQPDNTPGR SSEGMVLDFG 
DLKAIVQEEI IAPLDHALML KEGSVLSLGG VDNELFARIV WTPWQPTCEN MVLDFAGRII
AQLPDGVTLC RLKLYETHTS YAEWYASDNI D