Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6020 |
Symbol | |
ID | 8362202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7618473 |
End bp | 7619231 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968156 |
Product | Trans-aconitate 2-methyltransferase |
Protein accession | YP_003125635 |
Protein GI | 256424982 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGGA ATCCTGATGT GTATAACCAG TTTAAGGAAA AAAGAGCTGC TCCTTTCCAT GACCTTATCA GCCATATTCA TGCAGCACCG GGTATGCGTA TGATCGATCT GGGCTGTGGA ACGGGAGCGT TGACAAAAGT ACTGGCAGAT AAATTCCCGG AGTGCCAGGT GCTTGGTATT GATAGTTCTG CTGAAATGCT GGCCAAGGCT CCACAGCAGG AGAATATTTC CTTTGCGCAG CGGTCAGTAG AAGCGCAGCT GGCATTATCC GAAAAATGGG ATGTCATTGT TGCAAATGCT TCCTTGCAGT GGGTGGAAGA TCATCCCGTT CTTTTTCCTC AGGTTATTTC TAAATTATTG CCCGGTGGAC AATTGGCGGT GCAGATGCCA TCACAGCCGG AAAACGTGCT GAACCAGCTT CTCTATAAAC TGGTACATGA AAGTCCCTTT TATGATGTTT TAAAGGATGT TATCCGAAAT TCGCCGGTCC TGTCACTTGA TGACTATACG ACGCTGCTGT TTGGTAATGG GGCGAGAGAG GTGACCGTGT ATCAGAAGGT CTATCCGATA GTCGCTCAAT CTATCGAAAC ACTGTATGAG TTTATATCAG GATCTGCGTT GGTGCCTTAT ATGGAAAAGC TGGAAGAGCC TTTGCAATCA ACGTTTGTGC GTGTATTTAA GGAAAGAATA GCACAACATT ATCCTACTTC ACCAATGGTA TACGCATTCA AACGGATCAT ACTAGTAGCC AGTTTTTGA
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Protein sequence | MPWNPDVYNQ FKEKRAAPFH DLISHIHAAP GMRMIDLGCG TGALTKVLAD KFPECQVLGI DSSAEMLAKA PQQENISFAQ RSVEAQLALS EKWDVIVANA SLQWVEDHPV LFPQVISKLL PGGQLAVQMP SQPENVLNQL LYKLVHESPF YDVLKDVIRN SPVLSLDDYT TLLFGNGARE VTVYQKVYPI VAQSIETLYE FISGSALVPY MEKLEEPLQS TFVRVFKERI AQHYPTSPMV YAFKRIILVA SF
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