Gene Cpin_6020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6020 
Symbol 
ID8362202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7618473 
End bp7619231 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID644968156 
ProductTrans-aconitate 2-methyltransferase 
Protein accessionYP_003125635 
Protein GI256424982 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGA ATCCTGATGT GTATAACCAG TTTAAGGAAA AAAGAGCTGC TCCTTTCCAT 
GACCTTATCA GCCATATTCA TGCAGCACCG GGTATGCGTA TGATCGATCT GGGCTGTGGA
ACGGGAGCGT TGACAAAAGT ACTGGCAGAT AAATTCCCGG AGTGCCAGGT GCTTGGTATT
GATAGTTCTG CTGAAATGCT GGCCAAGGCT CCACAGCAGG AGAATATTTC CTTTGCGCAG
CGGTCAGTAG AAGCGCAGCT GGCATTATCC GAAAAATGGG ATGTCATTGT TGCAAATGCT
TCCTTGCAGT GGGTGGAAGA TCATCCCGTT CTTTTTCCTC AGGTTATTTC TAAATTATTG
CCCGGTGGAC AATTGGCGGT GCAGATGCCA TCACAGCCGG AAAACGTGCT GAACCAGCTT
CTCTATAAAC TGGTACATGA AAGTCCCTTT TATGATGTTT TAAAGGATGT TATCCGAAAT
TCGCCGGTCC TGTCACTTGA TGACTATACG ACGCTGCTGT TTGGTAATGG GGCGAGAGAG
GTGACCGTGT ATCAGAAGGT CTATCCGATA GTCGCTCAAT CTATCGAAAC ACTGTATGAG
TTTATATCAG GATCTGCGTT GGTGCCTTAT ATGGAAAAGC TGGAAGAGCC TTTGCAATCA
ACGTTTGTGC GTGTATTTAA GGAAAGAATA GCACAACATT ATCCTACTTC ACCAATGGTA
TACGCATTCA AACGGATCAT ACTAGTAGCC AGTTTTTGA
 
Protein sequence
MPWNPDVYNQ FKEKRAAPFH DLISHIHAAP GMRMIDLGCG TGALTKVLAD KFPECQVLGI 
DSSAEMLAKA PQQENISFAQ RSVEAQLALS EKWDVIVANA SLQWVEDHPV LFPQVISKLL
PGGQLAVQMP SQPENVLNQL LYKLVHESPF YDVLKDVIRN SPVLSLDDYT TLLFGNGARE
VTVYQKVYPI VAQSIETLYE FISGSALVPY MEKLEEPLQS TFVRVFKERI AQHYPTSPMV
YAFKRIILVA SF