| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5940 |
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| Symbol | |
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| ID | 8362121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7543376 |
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| End bp | 7544476 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968079 |
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| Product | carboxylate-amine ligase |
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| Protein accession | YP_003125559 |
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| Protein GI | 256424906 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2170] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.111906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAATA ACTTCACCCT CGGTATTGAA GAGGAATACA TGGTCCTGGA CCCCCAGACC
AGAGAACTGA GATCTCATGA ACAAAAGATC GTAGAACAAG CCCACAGGGT GCTCAGAGAT
AAAGTAAAAG CTGAATTTCA CCAGGCAGTT GTGGAAGTAG GCACAGAGGT ATGCGCCAAT
ATAGATGAAG CCTGCGAAGA TGTATCAATG CTGCGCAGGA CAATTGCCAG CATAGCAGGC
GACCTGGGAT ACAGCATCGG CGCTTCCGGT ACACATCCTT TCTCCAAATG GCAACTCCAG
CATATTACAG ACAATCCCCG TTACTTTGAG ATCGTCAATG AAATGCAGGA TGCCGCCCGC
TCCAACCTCA TCTTCGGATT ACATGTACAT GTAGGCATGG AAAACAGGGA AATGGCCCTC
CATATCGCCA ACTCCGTACG TTATTTCCTG CCCCATGTGT TTGCACTCAG TACCAACTCT
CCTTTCTGGG AAGGTCGCAA CACCGGCTTC AAATCTTATC GGACCAAGGT ATTTGATAAA
TTCCCCCGTA CCGGTATTCC CGATTACTTC GCCAGTATCG AAGAATATGA CCGGTATATA
CAGTTGCTCG TAAAAACCAA CTGTATCGAC AACGCCAAGA AAGTATGGTG GGACCTGCGG
GTACACCCCT TCTTCAATAC AGTGGAATTC CGCATCTGCG ACGTACCGCT CACCGTAGTG
GAAACCTGTA CCCTGGCAGC ACTGTTCCAG GCTGTTTGCG CAAAGATTTA TAAACTGCGT
ATGCAGAACC TCAACTTCAT CATCTATAAC CGTGCACTGG TTAATGAGAA CAAATGGCGG
GCATCCCGCT ACGGTATTGA CGGTAACCTG ATCGACTTCG GTAAAGAAAT GGAAGTCAAT
GCCAGAGCGC TGATTCATGA ACTGCTCGAC TTCGTGGACG ATGTAGTAGA TGAACTGGGC
AGCCGTCACT ATATACAGCG CACCCTCGAC ATTCTCGAAA ACGGTACCGG CGCCGATCAG
CAGTTAAAAG TATACACAGA TACCAAAGAT CTGGTATCTG TTACCGACTT CATCACTAAT
AGCTTTCTGA AAGACTGCTA A
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| Protein sequence | MLNNFTLGIE EEYMVLDPQT RELRSHEQKI VEQAHRVLRD KVKAEFHQAV VEVGTEVCAN
IDEACEDVSM LRRTIASIAG DLGYSIGASG THPFSKWQLQ HITDNPRYFE IVNEMQDAAR
SNLIFGLHVH VGMENREMAL HIANSVRYFL PHVFALSTNS PFWEGRNTGF KSYRTKVFDK
FPRTGIPDYF ASIEEYDRYI QLLVKTNCID NAKKVWWDLR VHPFFNTVEF RICDVPLTVV
ETCTLAALFQ AVCAKIYKLR MQNLNFIIYN RALVNENKWR ASRYGIDGNL IDFGKEMEVN
ARALIHELLD FVDDVVDELG SRHYIQRTLD ILENGTGADQ QLKVYTDTKD LVSVTDFITN
SFLKDC
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