Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5914 |
Symbol | |
ID | 8362095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7506917 |
End bp | 7507783 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968053 |
Product | histidine kinase |
Protein accession | YP_003125533 |
Protein GI | 256424880 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0349357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG AATTATTGAC GCACCTGATC CCCTCAATAA CGGTTACCCA GGAACCGATC ATGTATTCTT TACGGCTTAC TTATCCCGTA GGCAGTTTCC TTTTATCTTC AGGCATCCTG CCAGCTACCT GCTGGGGAAT CGTCGCGTTA TGGATCATTG TGATGATAAA ACGGCTGGAC GTATATGAGA AAAAGCAAAA CGAGCTGATA TTACAACTGG AACGGCAACA AGCCATGATG GCCATTCAGG AGGTCAGCAT ACAGGAAGCA GAACGCAAAA GAATTGCAGC AGATATTCAT GACGAAATAG GCAGTAACCT GGCCGCTATC AGGGTCAACC TGCAAAGTCT TCATTACAGC ACCGTTCAGG ACGAGCAGAA AGCCAATAGT CTGCTGCAAC TGGTAGACCA GACCAGTCAG AACGTAAGAA GAGCCGCACA CAACCTGGTC CCTCCCCTTT TCGGACATAT TCCCTTAACA GATATTCTTC AGTCATATTT TAGTTTACTA AGGACCCCGG AAGTACTTTT TCACTTTTGC AGCAACAAAT ACCAACCCTG TTTCGATGCC CGCCAGGAAC TGATGTTATA CCGGATCGTC ATGGAACTGA CGACCAACAT TATCAGACAT TCCAGGGCAT CCGCAGCGAC CATTCAACTG CTTTATTATC CCGAATACCT GGAGATACTG GTAGAGGACG ATGGAATCGG CTTGCCTTTG AATAGCCGCC CATCGGGTAT CGGACTTTCA GGCGTGAAAA CCAGGGTAAA ATCCCTGGGC GGACAAATGC ACATTGACTC AGGCATCTCT GGCACAACCT TTATCATTCA TATTCCCGTA ATTCCACAAC ATGCAGCCCC CTGTTAA
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Protein sequence | MSEELLTHLI PSITVTQEPI MYSLRLTYPV GSFLLSSGIL PATCWGIVAL WIIVMIKRLD VYEKKQNELI LQLERQQAMM AIQEVSIQEA ERKRIAADIH DEIGSNLAAI RVNLQSLHYS TVQDEQKANS LLQLVDQTSQ NVRRAAHNLV PPLFGHIPLT DILQSYFSLL RTPEVLFHFC SNKYQPCFDA RQELMLYRIV MELTTNIIRH SRASAATIQL LYYPEYLEIL VEDDGIGLPL NSRPSGIGLS GVKTRVKSLG GQMHIDSGIS GTTFIIHIPV IPQHAAPC
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