Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5866 |
Symbol | |
ID | 8362046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7457726 |
End bp | 7458313 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644968004 |
Product | Tail Collar domain protein |
Protein accession | YP_003125485 |
Protein GI | 256424832 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.255471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.964644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAT TCATGGGAAT CATTTTCCTA TTTGGCGAAA GCTTTGCGCC GGTGAACTGG CATCTTTGCG ATGGCACGCA GATGGCGATC AGCGGAAACG AAGCTTTGTT TAGCCTCCTT GGGACCACGT ATGGCGGCGA TGGTATGACC ACATTTGCGC TACCCGATCT TAGAGGACGT ACACCTATCG GTACAGGACA AGGCCCTGGT CTATCCTCCT ATGTGCAGGG CCAGATGGCA GGTACAGAGC AGCGTACGCT CATCATGACA AACCTGCCTG CGCATAACCA CGTGACGGTA AGCAACCTGA CGATCAATCC TGCTGCTTCT ACAGCAGCTG CTACTACCAA TATCCCTGGC AGTACCCTGG TAGAGGCGAC CTTGCCAAAT ATCGGCAGCG GCCCTGCGGC GCAGCCAATC AAAGGTTATG CAGTAGGCGA TAGCACCGCC ATACTGGCGC CATCAGCAGT ATCAGGTTCT GTAACCATTG GCATCGCCGG TGGCAGTCAA CCGTTTAGTA TTCAACGCCC ATATCTGGCT ATGAACTATG GCATAGCGCT ATATGGCATC TATCCAAGCC GGAACTAA
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Protein sequence | MDSFMGIIFL FGESFAPVNW HLCDGTQMAI SGNEALFSLL GTTYGGDGMT TFALPDLRGR TPIGTGQGPG LSSYVQGQMA GTEQRTLIMT NLPAHNHVTV SNLTINPAAS TAAATTNIPG STLVEATLPN IGSGPAAQPI KGYAVGDSTA ILAPSAVSGS VTIGIAGGSQ PFSIQRPYLA MNYGIALYGI YPSRN
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