Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5847 |
Symbol | |
ID | 8362027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7430545 |
End bp | 7431696 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967986 |
Product | lipase class 3 |
Protein accession | YP_003125467 |
Protein GI | 256424814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAA AAGACTGGCG GGTCCCCAAA AGTCTGCTTT TATTAGTAAT TACAGGCTGC CTTACGATTC TACAGGCCCC GACAGCCTCC GCTCAAAGAC TGAAACCCGG ATTTGATGCC AGCGAGTATC TTGATATGCT CAGTATGGAT TTTCTGACAG CAGATACTCC CTGGACCAAT AAACAAATCA CCATCCCTGA AAATGCCAGA TTGGTATACC GCTCTCCGGA GACTGGTTTA TATAATCGCT GGGACCTCTG GATACATGAC GATAAAACAG CTATGATCAT CATACGGGGC ACCGTCGGGA ATAAGGAATC CTGGATGGAG AACTTCTTTG CAGGGATGAT ACCTGCTACC GGTCAGTTAC AGCTTAATGA CAGTACCCAA TTCCGGTATA AACTGGCCAG GGATGCAAGG GCCTATGTAC ACGCCGGCTG GACCCTGGCA CTAGCCAGTA TGGCCCCGGA TATCGTAGCC CATATCAAGA CCTGTTACCA GCAGGGCATC CGTAATTTTT TCATATCAGG ACACAGTCAG GGAGGCGCCA TCAGCTTCCT GTTACGCTCC TATCTTCAAT ACCTGGAAGA ACCCGGTTTT CCAAAGGATA TTACCTACAA AACTTATTGC AGTGCCGCTC CTAAACCGGG TAACCTGTAT TATGCCTATG ACTTCGATTT CATCACCGGC AACGGCTGGG GCTTCCGTGT CGTAAATGTA AGAGACTGGG TACCGGAGAC GCCTTTTTCC ATCCAGACCA CCCGGGATTT CAATTCACCG AATCCCTTCA TGAATGTAAA AGGCGCACTT AAAAAACAGA ACATTTTCGT CCGGTTTGTC ATCGGATCTA TGTATAATAA ATTAGATCGC AGTACAAAAA GAGCGAGCCG CAGGATGCAG AAAATGTTGG GTAAAAGACT GGCTCGCCTG GTGAAAAAAT CGGTACCAGG TTATGTCCCT CCTTCTTTTA CAGAAAGTCA TAACTACAGC CCGGCCGGAA CACCCATCAT TCTATACCCT GATGCAGCAT ATGACAGCAA ACATGTTTTC GATGGAAAAA ATATCTTCCT TCATCACATG TATGCACCCT ACCAGGAGAT GACAAAAAGT ATCTATCAAT CGAGCATTTC CGGGAAGCCT ACAGAGCGTT AA
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Protein sequence | MHPKDWRVPK SLLLLVITGC LTILQAPTAS AQRLKPGFDA SEYLDMLSMD FLTADTPWTN KQITIPENAR LVYRSPETGL YNRWDLWIHD DKTAMIIIRG TVGNKESWME NFFAGMIPAT GQLQLNDSTQ FRYKLARDAR AYVHAGWTLA LASMAPDIVA HIKTCYQQGI RNFFISGHSQ GGAISFLLRS YLQYLEEPGF PKDITYKTYC SAAPKPGNLY YAYDFDFITG NGWGFRVVNV RDWVPETPFS IQTTRDFNSP NPFMNVKGAL KKQNIFVRFV IGSMYNKLDR STKRASRRMQ KMLGKRLARL VKKSVPGYVP PSFTESHNYS PAGTPIILYP DAAYDSKHVF DGKNIFLHHM YAPYQEMTKS IYQSSISGKP TER
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