Gene Cpin_5847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5847 
Symbol 
ID8362027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7430545 
End bp7431696 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content47% 
IMG OID644967986 
Productlipase class 3 
Protein accessionYP_003125467 
Protein GI256424814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCAA AAGACTGGCG GGTCCCCAAA AGTCTGCTTT TATTAGTAAT TACAGGCTGC 
CTTACGATTC TACAGGCCCC GACAGCCTCC GCTCAAAGAC TGAAACCCGG ATTTGATGCC
AGCGAGTATC TTGATATGCT CAGTATGGAT TTTCTGACAG CAGATACTCC CTGGACCAAT
AAACAAATCA CCATCCCTGA AAATGCCAGA TTGGTATACC GCTCTCCGGA GACTGGTTTA
TATAATCGCT GGGACCTCTG GATACATGAC GATAAAACAG CTATGATCAT CATACGGGGC
ACCGTCGGGA ATAAGGAATC CTGGATGGAG AACTTCTTTG CAGGGATGAT ACCTGCTACC
GGTCAGTTAC AGCTTAATGA CAGTACCCAA TTCCGGTATA AACTGGCCAG GGATGCAAGG
GCCTATGTAC ACGCCGGCTG GACCCTGGCA CTAGCCAGTA TGGCCCCGGA TATCGTAGCC
CATATCAAGA CCTGTTACCA GCAGGGCATC CGTAATTTTT TCATATCAGG ACACAGTCAG
GGAGGCGCCA TCAGCTTCCT GTTACGCTCC TATCTTCAAT ACCTGGAAGA ACCCGGTTTT
CCAAAGGATA TTACCTACAA AACTTATTGC AGTGCCGCTC CTAAACCGGG TAACCTGTAT
TATGCCTATG ACTTCGATTT CATCACCGGC AACGGCTGGG GCTTCCGTGT CGTAAATGTA
AGAGACTGGG TACCGGAGAC GCCTTTTTCC ATCCAGACCA CCCGGGATTT CAATTCACCG
AATCCCTTCA TGAATGTAAA AGGCGCACTT AAAAAACAGA ACATTTTCGT CCGGTTTGTC
ATCGGATCTA TGTATAATAA ATTAGATCGC AGTACAAAAA GAGCGAGCCG CAGGATGCAG
AAAATGTTGG GTAAAAGACT GGCTCGCCTG GTGAAAAAAT CGGTACCAGG TTATGTCCCT
CCTTCTTTTA CAGAAAGTCA TAACTACAGC CCGGCCGGAA CACCCATCAT TCTATACCCT
GATGCAGCAT ATGACAGCAA ACATGTTTTC GATGGAAAAA ATATCTTCCT TCATCACATG
TATGCACCCT ACCAGGAGAT GACAAAAAGT ATCTATCAAT CGAGCATTTC CGGGAAGCCT
ACAGAGCGTT AA
 
Protein sequence
MHPKDWRVPK SLLLLVITGC LTILQAPTAS AQRLKPGFDA SEYLDMLSMD FLTADTPWTN 
KQITIPENAR LVYRSPETGL YNRWDLWIHD DKTAMIIIRG TVGNKESWME NFFAGMIPAT
GQLQLNDSTQ FRYKLARDAR AYVHAGWTLA LASMAPDIVA HIKTCYQQGI RNFFISGHSQ
GGAISFLLRS YLQYLEEPGF PKDITYKTYC SAAPKPGNLY YAYDFDFITG NGWGFRVVNV
RDWVPETPFS IQTTRDFNSP NPFMNVKGAL KKQNIFVRFV IGSMYNKLDR STKRASRRMQ
KMLGKRLARL VKKSVPGYVP PSFTESHNYS PAGTPIILYP DAAYDSKHVF DGKNIFLHHM
YAPYQEMTKS IYQSSISGKP TER