Gene Cpin_5683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5683 
Symbol 
ID8361863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7251218 
End bp7252144 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content49% 
IMG OID644967826 
Producthypothetical protein 
Protein accessionYP_003125307 
Protein GI256424654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.848601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.261185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATC AGAAAAGTAG CTATCAACAG ACAGCATTAG GCGACGTCGC CGCAAGACAG 
TTGGCCATCG CCACACGTAC CGTTCCCCAG ATGGTCACTA TCAGCCCCCG TTGGCTGACC
CGCCTCCTCA ACTGGGTACC GGTGGAATCA GGGGTATATC GCTTAAATAA GGTGAAAGAC
GCAGGCGCCA TCGAGGTAGA TTGCTCGGCC AGAGATGAAC GTACCCTGCC TCAGACTTTC
GTGGATTACA TCGAAAATCC AAGAGAATAC AATCTGGCAG CCGTACAAAC CATCGTGGAT
GTACATACCA GGGTATCCGA TCTCTATAGC AAACCTTATA ACCAGATCAG TGAACAGTTA
CGCCTGGCAA TAGAAACCAT CAAAGAACGG CAGGAGAGTG AATTGATCAA TAACAAGGAA
TACGGTCTGT TACACAGCGT AGCTCCTTCT CAGCGTATCA AAACACGGAC GGGCGCGCCT
ACCCCGGATG ACCTGGACGA ACTGATTGCC CTGGTATGGA AAGAACCAGG TTTTTTCTTA
TTACATCCGC AAGCCATCGC CGCTTTCGGT CGTGAATGTA CCCGGAGAGG AGTACCACCA
CCCACTGTCA ACCTTTTTGG CTCCCCGTTC ATCACATGGC GTGGTATACC TTTAATTCCC
TGCAATAAAC TGCCGATTGA AAAAGGGAAA TCAAAGATCA TCCTCCTGCG TACCGGCGAA
AGCCGTCAGG GAGTAGTAGG GCTCTTCCAG CCAGGTTTAC AGGGCGAACA ATCTCCCGGT
CTGTCAGTAC GCTTTATGGG CATCAATGAC AAGGCCATCG CCTCTTATCT GGTATCATTA
TATTGTTCAC TGGCAGTATT GGTAGATGAT GCCATTGCCG TACTGGACGA TGTTGAAATC
GGCAATTACC ATGAATACAA ATATTAA
 
Protein sequence
MADQKSSYQQ TALGDVAARQ LAIATRTVPQ MVTISPRWLT RLLNWVPVES GVYRLNKVKD 
AGAIEVDCSA RDERTLPQTF VDYIENPREY NLAAVQTIVD VHTRVSDLYS KPYNQISEQL
RLAIETIKER QESELINNKE YGLLHSVAPS QRIKTRTGAP TPDDLDELIA LVWKEPGFFL
LHPQAIAAFG RECTRRGVPP PTVNLFGSPF ITWRGIPLIP CNKLPIEKGK SKIILLRTGE
SRQGVVGLFQ PGLQGEQSPG LSVRFMGIND KAIASYLVSL YCSLAVLVDD AIAVLDDVEI
GNYHEYKY