Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5683 |
Symbol | |
ID | 8361863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7251218 |
End bp | 7252144 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967826 |
Product | hypothetical protein |
Protein accession | YP_003125307 |
Protein GI | 256424654 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.848601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.261185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATC AGAAAAGTAG CTATCAACAG ACAGCATTAG GCGACGTCGC CGCAAGACAG TTGGCCATCG CCACACGTAC CGTTCCCCAG ATGGTCACTA TCAGCCCCCG TTGGCTGACC CGCCTCCTCA ACTGGGTACC GGTGGAATCA GGGGTATATC GCTTAAATAA GGTGAAAGAC GCAGGCGCCA TCGAGGTAGA TTGCTCGGCC AGAGATGAAC GTACCCTGCC TCAGACTTTC GTGGATTACA TCGAAAATCC AAGAGAATAC AATCTGGCAG CCGTACAAAC CATCGTGGAT GTACATACCA GGGTATCCGA TCTCTATAGC AAACCTTATA ACCAGATCAG TGAACAGTTA CGCCTGGCAA TAGAAACCAT CAAAGAACGG CAGGAGAGTG AATTGATCAA TAACAAGGAA TACGGTCTGT TACACAGCGT AGCTCCTTCT CAGCGTATCA AAACACGGAC GGGCGCGCCT ACCCCGGATG ACCTGGACGA ACTGATTGCC CTGGTATGGA AAGAACCAGG TTTTTTCTTA TTACATCCGC AAGCCATCGC CGCTTTCGGT CGTGAATGTA CCCGGAGAGG AGTACCACCA CCCACTGTCA ACCTTTTTGG CTCCCCGTTC ATCACATGGC GTGGTATACC TTTAATTCCC TGCAATAAAC TGCCGATTGA AAAAGGGAAA TCAAAGATCA TCCTCCTGCG TACCGGCGAA AGCCGTCAGG GAGTAGTAGG GCTCTTCCAG CCAGGTTTAC AGGGCGAACA ATCTCCCGGT CTGTCAGTAC GCTTTATGGG CATCAATGAC AAGGCCATCG CCTCTTATCT GGTATCATTA TATTGTTCAC TGGCAGTATT GGTAGATGAT GCCATTGCCG TACTGGACGA TGTTGAAATC GGCAATTACC ATGAATACAA ATATTAA
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Protein sequence | MADQKSSYQQ TALGDVAARQ LAIATRTVPQ MVTISPRWLT RLLNWVPVES GVYRLNKVKD AGAIEVDCSA RDERTLPQTF VDYIENPREY NLAAVQTIVD VHTRVSDLYS KPYNQISEQL RLAIETIKER QESELINNKE YGLLHSVAPS QRIKTRTGAP TPDDLDELIA LVWKEPGFFL LHPQAIAAFG RECTRRGVPP PTVNLFGSPF ITWRGIPLIP CNKLPIEKGK SKIILLRTGE SRQGVVGLFQ PGLQGEQSPG LSVRFMGIND KAIASYLVSL YCSLAVLVDD AIAVLDDVEI GNYHEYKY
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