Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5665 |
Symbol | |
ID | 8361845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7225281 |
End bp | 7226054 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644967808 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003125289 |
Protein GI | 256424636 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.135845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATA AGATAGAAAA GTCAACGAAC GAACAGCTTG TGGCCCTTGT TACCGGGGCC AACCAGGGAG TAGGTTTCCA GATTGCCAAA GAATTGTCAG CGAATGGCTA TTATGTATAC CTCGGGTCGC GTAACCTGAG CAACGGAGAA AAGGCAGCTG CTGAAATTGG CGGCGCTACC TATGCTATCG AGTTGGACGT TACGAAGCAG GCGACCATTA ATGCGGCAGT AGAACGTATC ATGAAAGAAC AGGGGCGCCT GGATCTGCTG GTGAACAATG CAGGTATCGC ACATGCCGGA ACAACTGCGC GTACGCCGGA AGAAATGGTA GCGAAAAGCC GGCCCAGCAC AGTGTCAATT GACGAGGTGC GAACCGTCTG GGATACCAAT GTATTCGCCG TTATTGCCGT TACCCAGGCA GCCATACCCT TACTGCGGAA ATCAAAGGCC GGCCGTATCG TGAATGTATC CAGCGGATTA GGTTCCCTCA CCTGGATCTC AGATCCTACA TGTTGGGCCA GAGAGCATTT TGGTATCGTC TATGCGGCTT CCAAAACAGC CCTCAATGCG GTTACCCTTG CCTTTGCCAT GGAGCTTGAA AAAGAGAATA TCAAGGTGAA TGCAACAAGT CCGGGTTATA CAGCGACCGC TTTGAATAAT TTCCAGGGTA CCGATAGTCT GGAAGTAGGC TCCCGGGAAC CAGTGCGTGT AGCATTGGAG ACGGATGGCC CAACCGGAGG TTTTACCGGT CCGGACGGCC CCTTACCCTG GTAA
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Protein sequence | MENKIEKSTN EQLVALVTGA NQGVGFQIAK ELSANGYYVY LGSRNLSNGE KAAAEIGGAT YAIELDVTKQ ATINAAVERI MKEQGRLDLL VNNAGIAHAG TTARTPEEMV AKSRPSTVSI DEVRTVWDTN VFAVIAVTQA AIPLLRKSKA GRIVNVSSGL GSLTWISDPT CWAREHFGIV YAASKTALNA VTLAFAMELE KENIKVNATS PGYTATALNN FQGTDSLEVG SREPVRVALE TDGPTGGFTG PDGPLPW
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