Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5641 |
Symbol | |
ID | 8361818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7191681 |
End bp | 7193684 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967782 |
Product | hypothetical protein |
Protein accession | YP_003125266 |
Protein GI | 256424613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000396754 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.777644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC CTCTGAACCT GTCTGTTCGC ATAGCAACAG CGCTGGTACT CTTTTTTCAG TTGTTCATCA CGCCGGTAGT GGCCCAGATA TCCTGGCCAC AGGGACAACT GTTGCCCTCG TTTCCCTCAA CAGCGCAAAC GCAGGATCTA TTTATTTTAC GTGAATCTTC TACCCGCTGG GAAGGAGAAG GCTCCAGTCT CAGTCATAAG ACGGGAAGGC TGGAGTCGGA CGGATGGCTT TGTCAGACGG GCATCGATGC TGCCGATGAG CACATGATCT ATGGCCCTTA TGACATGAGT ATTCCTGCCG GTCCTAACGT AGCCGAATTC AGAATGAAAG TCGATAACAA CACCGCTAAT GATGATCCTG TGGTGGATAT CGACGTCAGA AATGCCACAA CCGGCCAGAT TCTGGCTTCC AGGGCAGTTA CCCGTAAGCA GTTTCCGATA GCAGGAGACT ATACGAGTAT TACCCTGCCT TTTACCATGC CGGCCAACAA TCAGTCTATT GAGCTCCGCG TATACTGGAG AGGTACCTCC TATACAAAAG TAGACTGGGT TGGTGTACAA CAAAACGGTT CCTCTGCAGA GATGTACCTT TTTGCGTCCC TGAAAGGAAT TGTCAACAGG ACACAACCAC GTCTTTTCTC TTATGAAGGA GACGCCTTTG CAGAAGGACA GTATACCTGG CTGCAATCCC TGGGTTTAAA CTGGAATGAG GTCAGCAACA AATGGGACCT TATTACCAAG TACCGTAATG AAATCTCCGG TCTGATCGTG TATGATCCTA ACCAGATCCA TACCGTGAAT CTGGCAACTG TACTGGCCAA AGACAAGAAA GCGCTGATTG CGTCTCCGCT GCTCCTGTCC AGGTTACAGG CGGCACCTTA TAATCTGCCT ATCCTGCTGG ACTTACGTGG ACAGTACAGC AGCAAACTGG CGGTATACCA GGCATTGTAT AATACTTACT GGCCTAACCT TGATCACCGC GTATTGATTG GTCTGAACCC CGATGCGCAT AAAGCAGCAT TACGTGAATA TGCGGTAGCT ACCGGACTGG CTACTATCTG GTTGGATCCG AATGTGGCTG CTGAAAGCAC CCTGCTGAAC AGCTTCCTGA GTTCCATGCC TGCCGGTTCC AATTATATGG GCTGGTGGCC CGAAGAAGCA CCGGGAGTAC AAAGGGCTTC ACAATATGGT ATCGCTACCA TTGCGAGTGA CTGGGCCACT AACCTCACCG TACATAGCGG TACTTCCAGA ACGGTGAATG TGAAACCGAT GCCGGCAAAA CCTGCCTTGC AGAATAAACT GTATGTAGCT TTTATTCTGA GTGATGGGGA TAACTTACAG TATGTTGAAC ACCTGATGCG TAAGCTCTGG AATAATCCTG ACCGTGGCGC TGTACCGATA GGATGGACAT TGTCTCCTGC TATGCTGGAC GCTATGCCAG GGGCGCTGAA CTATTATTAC CAGAGTGCCA CAAATAATGA TAACCTGATC TCTGGTCCTT CTGGTTATGG CTATACTTAT CCTAATAACT GGCCTAATCA GGCAGCTTTG GATCAGTTTG TTGCTAAGAC AGAGAATTAT AACCGTCGTG CGGGATTCCG TGTAATCACG ATCTGGAATA CTATCACTGG TGGTATTAAT CAGAATGTCG GACAATCGTT TGCGACCAAT GCACCTTATA CATTGGGATT GACCGCACAG AACACCGGCG GAGGTATGAC CATTTATAAT AACAGTATGC CGGGTATGGC GCTTTCCTGT AACTACTGTA CCAATGAGCA GGCCATGAAA GATCATATTG CTTCTGCTGC TGCCGGCTGG AACGGTGCTT CACCACGTTT TATCATTATA CAGGCACAAC CCTGGACAAA CGTGACGCCG ACCAGCTTTA AGAATGTCGC TAATTCACTG AATGCGAATT ACCAGGTAGT AAGACCTGAT CATATATTTC AGCTGATGAG AGAGGCGAAT GGCCTGACAG TGAATCCGCA GTAA
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Protein sequence | MIKPLNLSVR IATALVLFFQ LFITPVVAQI SWPQGQLLPS FPSTAQTQDL FILRESSTRW EGEGSSLSHK TGRLESDGWL CQTGIDAADE HMIYGPYDMS IPAGPNVAEF RMKVDNNTAN DDPVVDIDVR NATTGQILAS RAVTRKQFPI AGDYTSITLP FTMPANNQSI ELRVYWRGTS YTKVDWVGVQ QNGSSAEMYL FASLKGIVNR TQPRLFSYEG DAFAEGQYTW LQSLGLNWNE VSNKWDLITK YRNEISGLIV YDPNQIHTVN LATVLAKDKK ALIASPLLLS RLQAAPYNLP ILLDLRGQYS SKLAVYQALY NTYWPNLDHR VLIGLNPDAH KAALREYAVA TGLATIWLDP NVAAESTLLN SFLSSMPAGS NYMGWWPEEA PGVQRASQYG IATIASDWAT NLTVHSGTSR TVNVKPMPAK PALQNKLYVA FILSDGDNLQ YVEHLMRKLW NNPDRGAVPI GWTLSPAMLD AMPGALNYYY QSATNNDNLI SGPSGYGYTY PNNWPNQAAL DQFVAKTENY NRRAGFRVIT IWNTITGGIN QNVGQSFATN APYTLGLTAQ NTGGGMTIYN NSMPGMALSC NYCTNEQAMK DHIASAAAGW NGASPRFIII QAQPWTNVTP TSFKNVANSL NANYQVVRPD HIFQLMREAN GLTVNPQ
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