| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5584 |
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| Symbol | |
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| ID | 8361761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7133123 |
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| End bp | 7134541 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967728 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003125212 |
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| Protein GI | 256424559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.626163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC AACCAACATC TTTCCGGCGG TCCTTCGGAC TGCTGGACGC TACGATGATT
GTAGCCGGCT CTATGATCGG TTCAGGTATT TTCCTGGTAA GCGCCGATAT TACCCGTAAT
GTAGGCTCCG CCGGCTGGCT GGTGTTGATA TGGATTATTA CCGGTCTGCT TACACTGACG
GCAGCGCTGA GTTATGGAGA GTTAAGCGGC ATGTTCCCAC ATGCCGGCGG ACAGTATGTA
TACCTGAAGG AAGCGTTTAA CCGGCTGACG GGCTTCCTGT TTGGCTGGAG TTTCTTTACG
GTGATACAGG CAGGTTCTAT TGCCGCAGTA GGAGTGGCAT TTGCCAAGTT CTCGGCGTAT
ATGTTTCCTG TATTGAGTGA GAAGCATATT GTGGCAGATC TGGGCTTTAT GACCATATCT
GCCGCACAGC TTACTTCCAT TCTGCTGATC GTATTACTCA CCTTCATCAA TACACTTGGG
GTAAAGGAAG GGAAGCTGAT ACAGACCGGT TTTACACTGG CGAAGATTGC CGCCCTGCTG
GCATTGATCC TGTTCGGTTG TTTTGCGGCG AATAAGACGA TCTGGGATGC CAACTGGCGA
AGCGGATTCG TATTGCAGCA AATGAGTGCA ACAGGTGGCA TGACCCATCT GAGTGCTTAT
GCCGGTGCAG GGTTTGCCGC TTTGGGCGCT ATAGCCGGTA GTATGGTGGG CAGTCTGTTC
AGCAGTGATT CCTGGAATAA TGTCACCTTT ATTGCAGGTG AGATCAAACG ACCGGAACGT
AATATCGGGA GAAGTCTTTT CCTGGGTACA TTGATCGTTA CCGTGATTTA TGTCGCCACC
AACCTGGTTT ATCTTGGGGT ATTACCTCTC CGGGAGATCG CATTCGCAGA AAACGAAAGG
GTAGGTGTAG CTGCGGCTGT AAAGATCTTT GGGGCAAGGG GGACGTATAT CATTGCCGGA
CTGCTGATGG TGTCTACTTT TGGCTGTAAT AACGGACTGA TACTGTCCGG AGCAAGGGTG
TGTTATACGA TGGCAAAGGA TGGCGTTTTC TTTAAACAAC TGGCTACGCT GAATAGAAAT
GCGGTACCAG GTAAAGCCTT ATGGATCCAG TGTATCTGGG CTTCGCTGTT ATGCCTCAGC
GGCAAATACG GTCAGTTGCT GGACTATGTT ATCTTCGTCG TACTGATTTT TTACATCCTC
ACCATCGTCG GTATCTTCCG CCTGCGCCGT AGAAGACCTG AGCTTCCAAG GCCATATAAA
GCCTTTGGTT ACCCTGTATT GCCATTAATG TATATTATAT CGGCCAGCAT CATTTGCGTG
GCGCTATTGG TCTATAAACC GCTTTATACA TGGCCCGGGC TATGCATTGT ATTACTGGGT
ATACCGGTAT ACTATGCGGT ATGGAAAAAA AAGGATTAG
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| Protein sequence | MSDQPTSFRR SFGLLDATMI VAGSMIGSGI FLVSADITRN VGSAGWLVLI WIITGLLTLT
AALSYGELSG MFPHAGGQYV YLKEAFNRLT GFLFGWSFFT VIQAGSIAAV GVAFAKFSAY
MFPVLSEKHI VADLGFMTIS AAQLTSILLI VLLTFINTLG VKEGKLIQTG FTLAKIAALL
ALILFGCFAA NKTIWDANWR SGFVLQQMSA TGGMTHLSAY AGAGFAALGA IAGSMVGSLF
SSDSWNNVTF IAGEIKRPER NIGRSLFLGT LIVTVIYVAT NLVYLGVLPL REIAFAENER
VGVAAAVKIF GARGTYIIAG LLMVSTFGCN NGLILSGARV CYTMAKDGVF FKQLATLNRN
AVPGKALWIQ CIWASLLCLS GKYGQLLDYV IFVVLIFYIL TIVGIFRLRR RRPELPRPYK
AFGYPVLPLM YIISASIICV ALLVYKPLYT WPGLCIVLLG IPVYYAVWKK KD
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