| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5533 |
|---|
| Symbol | |
|---|
| ID | 8361710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7061979 |
|---|
| End bp | 7062719 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644967679 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_003125163 |
|---|
| Protein GI | 256424510 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.164819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAG AAAACAAGAA AGTGCGTATT GCCGCAGTGG CTGATATTCA TGTAACAGAT
ACCGATAAGA ACAAGTGGGT AGATTATTTT AAAGAGGTAT CTAAAAATGC AGATGTATTA
TTAATCTGCG GCGACCTGAC GAATACCGGT GATGAAAGCG AAGCGCAGAT CTTGTGTGAT
GAACTGAAGG CCTGTACGAT TCCGGTCATA GCCGTGCTGG GTAATCATGA TTATGAGAAG
GGGCGGCAGA AGCTGATCCG GCAGACATTG CAGAATGAAA ATGTACATAT CCTGGATGGA
GAGGCAATCG TGATCAAAGA CGTCGGATTT GCCGGTGTGA AAGGTTTTGG CGGCGGATTT
GACAACTATA TGCTATCCAT GTTCGGAGAA GATGCTATGA AAGCCTTTGT ACAGGAGGCC
GTGGATGAGG CATTACATTT AGACAGGGCG CTGGCCCGGA TCGATCAACA GCATGACAAG
CTAAAAAAGA TCGCCTTACT ACATTATTCA CCACTGAGAG AAACCGTCGT AGGCGAACCT
GAAGTAATCT TTCCTTTCCT CGGATCTTCC CGTCTGGCAG AGCCATTAAT ACGTCGTGAG
GTGACGGCTG TATTTCATGG TCATGCACAT ATGGGTACCC TGGAAGGCAC CCTAACAGGG
GGCGTACGCG TGTTTAATGT AGCTAAACCT GTATTGTCGA AAGCAGGATA TGAGATCCCT
TATTATATAC TGGAAGTCTG A
|
|---|
| Protein sequence | MDAENKKVRI AAVADIHVTD TDKNKWVDYF KEVSKNADVL LICGDLTNTG DESEAQILCD
ELKACTIPVI AVLGNHDYEK GRQKLIRQTL QNENVHILDG EAIVIKDVGF AGVKGFGGGF
DNYMLSMFGE DAMKAFVQEA VDEALHLDRA LARIDQQHDK LKKIALLHYS PLRETVVGEP
EVIFPFLGSS RLAEPLIRRE VTAVFHGHAH MGTLEGTLTG GVRVFNVAKP VLSKAGYEIP
YYILEV
|
|---|
| |