Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5528 |
Symbol | |
ID | 8361705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7053685 |
End bp | 7054107 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967674 |
Product | protein of unknown function UPF0047 |
Protein accession | YP_003125158 |
Protein GI | 256424505 |
COG category | [S] Function unknown |
COG ID | [COG0432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.652918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAT TCCAGGAATC GTTGGTATTA CAGCAAAGAA GGAGAGGATT TCACTTGATA ACCGCAGAGG TTTTACAGGT TATTCCGCAG CTCCGGGACA TCCGGGTGGG TATGTGCCAG GTATTCATTC AGCACACTTC GGCCTCGCTG ACGATCAACG AAAATGCCGA TCCGACAGTG AGAAAGGATT TTGAAATGTA TTTCAGCAAA GCAGTGCCTG AAAACGATCC TGATTATGAA CATGATGATG AAGGTCCGGA TGACATGCCT GCACATCTCA AGGCTGCGAT GTTGGGTTCG TCTGTGATGA TACCTGTCCG CAATGGTAAC TTTGCCTTTG GCACCTGGCA GGGAATTTAT CTCTGCGAGC ATCGTAATTA TGGCGGTAAC AGAAGACTGG TAATCACCGT CTGGGGAGAA TAA
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Protein sequence | MKIFQESLVL QQRRRGFHLI TAEVLQVIPQ LRDIRVGMCQ VFIQHTSASL TINENADPTV RKDFEMYFSK AVPENDPDYE HDDEGPDDMP AHLKAAMLGS SVMIPVRNGN FAFGTWQGIY LCEHRNYGGN RRLVITVWGE
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