| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5522 |
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| Symbol | |
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| ID | 8361699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7047018 |
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| End bp | 7047953 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967668 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003125152 |
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| Protein GI | 256424499 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00063223 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.246639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAACTG AGAAACTGAA ACGCATACTC CGGCAATATC TGTTGGGGCA GGCGAAGGAA
AAGGAAAACA ACGTTATTGA AAATTGGTAT CAATCCTTTG ACAATGAGCC TGTAACATCA
TTAAGTTCCA CGGAAGAAGA GCATATCCGG CAGGAGATCT GGGGTAAGAT ACAGCCAGAG
ATCCGTACAC GTAAGGTACA TTATCTGAAA AGAAACCTGG CTGCAGCTGC AGCGGTCGCT
TTACTGCTTG CAGGAGGCAT TACAGGCTAT CTGCTGACCA GGAAGTCGTA CGGATCAGCC
TATATCACCG TTACCACCGC TATTGGTCAG AAAAAGACCA TCCAGCTGGC AGATGGCTCC
AGCCTGATGC TGAATGCCGG CTCTACCGTC CGTATACCGG AAAATATGGA CCGGGAAAGA
AGACTGAACA TCGTGGACGG TGAGGTCTTT TTTGATGTAA AAGGGAACCC GGATATACCC
TTTATTGTGG AGAGCGGTCC GCTGACCACG ACGGTACTCG GTACCTCTTT TAATGTCAGC
GCCTATAAAT CCCTGAACAG AATGAGCGTA GCCGTAACGG ACGGTAAAGT AAGTGTAGCA
AGGGAAAATA ACAAAGCCGA CATATTAGTA AAAAATGAAG CACTGACCTA TGACCGACAG
CAGGGTACCG TTTCTGTAGA TCCGCTGGAT AACAGTCTGC TGGGATGGCA GCAGGGCACA
TTAGTGCTGA ATGACGCCTC CTTTGAAGAT ATGGTTGTCC TGATGCAGAA AAACTACGGT
ATTACTCTGA CAACAGCTGT ACAGCGCATA CGGGAGACGA GGTATACTAC CGAATTGTCG
ACCGCTATGG AACCTGTGAA AGCCGCGGAA GTACTGGCAG CCATCCACCA TCTGAAAATA
AAAGTGACCG GCCACGAGGT CACACTCTAT GAATAA
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| Protein sequence | METEKLKRIL RQYLLGQAKE KENNVIENWY QSFDNEPVTS LSSTEEEHIR QEIWGKIQPE
IRTRKVHYLK RNLAAAAAVA LLLAGGITGY LLTRKSYGSA YITVTTAIGQ KKTIQLADGS
SLMLNAGSTV RIPENMDRER RLNIVDGEVF FDVKGNPDIP FIVESGPLTT TVLGTSFNVS
AYKSLNRMSV AVTDGKVSVA RENNKADILV KNEALTYDRQ QGTVSVDPLD NSLLGWQQGT
LVLNDASFED MVVLMQKNYG ITLTTAVQRI RETRYTTELS TAMEPVKAAE VLAAIHHLKI
KVTGHEVTLY E
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