Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5421 |
Symbol | |
ID | 8361598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6931380 |
End bp | 6931964 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967567 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003125051 |
Protein GI | 256424398 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.305949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTGGA AACGTTTATT TTCTTTATCA AATATAAGTA CGGCTGTTAT GACCGTATTC CTGGTGCTGA TGCTGGTAAA CCCATCGGTG AAAGCAGCTG TTATGCAGGG TTTGATGAAG GTCGGACTGT TCCAGCCGGG TGTACCGGAA GAAGTGGCAC CGGAGAGTAA AATGGCGCCG GATATGGCAT TTGCAGATGG AGAGGGAAAT ACATTTACAC TGTCATCGCT GAAAGGGAAG GTAGTATTTC TGAACTTCTG GGCTACCTGG TGCCCGCCAT GCCGTGCGGA GATGCCATCG ATCAATTCCT TATACAAACA GTATAAGGCA GATAAAAACG TCGTATTCCT GACCGTGGAT ACAGACGGTA ATTACAAAAA GGCAAAACGA TTCATCGAAA AGCAGCAGTA CGAATTGCCT GTGTATGTGG CTGACAGCCG TATTCCGGAA GAACTGCTAG GTAAGTCGAT TCCGACTACC ATCATCCTCA ACAAGAAGGG GCAGATCGTA TACCGGCAGG AAGGGGCCGC TGATTATGGC AACGACAGGT TTATTGACTA TTTCGGGAAG TATATCCGGA AGTAA
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Protein sequence | MGWKRLFSLS NISTAVMTVF LVLMLVNPSV KAAVMQGLMK VGLFQPGVPE EVAPESKMAP DMAFADGEGN TFTLSSLKGK VVFLNFWATW CPPCRAEMPS INSLYKQYKA DKNVVFLTVD TDGNYKKAKR FIEKQQYELP VYVADSRIPE ELLGKSIPTT IILNKKGQIV YRQEGAADYG NDRFIDYFGK YIRK
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