Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5292 |
Symbol | |
ID | 8361469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6736094 |
End bp | 6741184 |
Gene Length | 5091 bp |
Protein Length | 1696 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967440 |
Product | erythronolide synthase, Beta-ketoacyl-acyl- carrier-protein synthase I |
Protein accession | YP_003124924 |
Protein GI | 256424271 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0888589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.456588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCTT TAGCAATATT AAAGGCCCTC AGTACCGGCG CTATCAGTGC CGGTGCGGCG AGGGAAGCCC TGAAACAACT AGCAGCGGCG CCAGTTTCTG TAACACCGGA AATTGACCGG CGTCCGACGC CTGAACCAAT AGCTATTATC GGTATGTCAG GAAGGTATCC TGATGCACCG GATGTGAAGA CATACTGGAA TAACCTGGTT GCCGGTAAAA ATGCGGTACG GGAGATTCCT TTATCCCGTT GGGATGTACC CTCCTTTTAT GACCCAAGAC CTTTACAGAA AGGAAAAGTG TACTGTAAGT GGTTAGGAAT GCTGGATGAT ATCGCCGAGT TTGATCCTTT ATTCTTTTCC CTTTCTCCCG GAGAGGCGGA ATGGATGGAT CCTCAGCATC GTATTTTCCT GCAGGAAGCT TATAAGGCAT TTGAGGATGC GGGTTATGCT GGGGAAGTGC TGAATGAGCA AAAATGTGGG GTTTATCTGG GGATTATGAG CAATGAATAT GCCTTTTTAC AGCATCAGCT GCAACCCGGT ATTGCAGGTG CAACGGGCAA TAGTTATTCT ATTGCTGCGG CCCGCATCGC TTATTTTCTG AATCTGAAAG GCCCTGCGAT AGCTGTTGAT ACGGCCTGTT CTTCATCATT GGTGGCGATT CATCTGGCCT GTCAGGCGTT GAGAAACCGG GAAACAGACA TGGCGCTGGC CGGTGGTGTT AGCCTTTACC TGACACCAGA GTCTTACATC AGTATGTGTT CGGCCGGTAT GTTGTCTAAA GATGGTCAGT GTAAGGCCAT GGATAACAGT GCGAATGGTT TTGTACCAGG AGAAGGCGCT GGAGCTGTTA TCCTGAAACG TTTAAAAGAC GCAGAGGCAG ACAATGACAA TATTCTCGGC GTGATCATTG GCTCGGGTAT TAACCAGGAT GGTCGTACAA ACGGGATCAC TGCCCCCAGT ATGAACAGTC AGGCAGCATT GTTACGTGAC ATTTATGCGG GATATAAGAT ACATCCGGAA ACGATCAGCT ATGTAGAATT ACATGGCACG GGAACAAAGC TGGGAGATCC TATAGAGCTG GAAGCGCTGT CTACAGTATT CAGAGAACAT ACCTCCCGGC CGCATTTCTG TGGATTGGGG TCCGTTAAAA GTAATATCGG CCATACTTCT GCGGCAGCGG GCGTAGCCAG TGTACAGAAG GTACTGTTGT CAATGCATTC ACAAGCGCTG CCGCCGACAT TGCATGTGAC AAGGCCCAAT GAGCATTTTA AATTTGAACA ATCACCATTT TATATATGCG ATACACTACG ACCATGGGAT AGTAGAGGAG AACGGCGCAG AGCAGGGATC AGTTCCTTTG GTTTCAGCGG TACTAATGCC CACCTTGTTG TAGAAGAATA TCAGCCGGTT CCGAAGATAC GCCCGACAGA AAGTATATCT GTGCTGGCAA GTGTTTTTGT ACTATCTGCA AAGACAGAAG AGCAACTGAA AGTATATGCG GGTATTATGC GACAGTTCCT GGAGGCACAT ACAACGCTCA ACTTCACAGA CCTGCTGTAT ACGCTGCAGA TAGGTAGAGA CGCTATGGAC TATAGATTAG CATTCGCAGC TGCGGGTATC GCTGATGCGA TTGGTAAACT CAGTGCGTTT TTGAATGGCC ATAACAATGG TAGCTTTTTT ACAGGACAGT TGAGCGGAAA AGCCGCTCCT GCCAATGGAA ACGGCGCTAC GTTATCCCGC TTATGGGCGA ATGGTGCGAG TGTGGACTGG CAAGTGTTTT ATGAGAAAGT GAAACCTCGC CGGATTAGTC TGCCTACCTA TCCATTTGCG AAAGAGGTCT ACTGGATAGC CGCATCGGAA CAAAAACAAC CCGTGCAGGA GCGTCCGTAT CGTATTATTC ATAAGACCTG GGAAGAACAG GTGATAAATA CATCCAATGC TTTTCATGGT AAGCTGCTGG TATTAGCAAC AACACCGATG CTTTCTCTGG CAAATGAAAT CAAACGTCAA TACAATGATA TAGACATTAT CGACCCTGTA AGCAGCGCGT TGCCGGAAGG TGGAATGCCT GCCGCATATA CAGGGCTGAT AGACCTGACA GGTTGTGATG AAGCGGCGGA ACAGGCATTG ACAGGTCTTG CATTGCTACA ACAGCTAATC AGTGCAGGCA ACCGCCCATT GACGATGATC GGTGTTACAC AAGGATTGGA GACAATAGGA GGAAAGTCTT CCGGACAAAC AGGTGCGCTC CGTGCGGGAC TTTTCAGAAT GTTGCAGGCT GAATATCGTT ATCTGAATGC GATACATCTT GATATTGAGA AAGAGGGCAG TACAGCATTG CAGGCCGCTC ATATATTGTC GGAACTGCGT GTTGCGGGAA TCCACCCTGA AATTTGTATC CGGGAGGGAA AGCGTTACCG CGCAGTACTT ACAGCTAAGA AGATAGAGAA GGATATTAAT ATACCAGCTT TTCCTGCCGG AGGCGTATTG CTGGTAACGG GTGGTACCCG TGGGATCGGA TTGGAATGTG CACGGCATTT TGTGAAAAAG TATGGTGCCA GGAAAGTGGT GCTTACGGGT AGAGAAGCCC TGCCACCTGA AGAACAGTGG AGTGTGCTCT TACAATCGGA TTCTGTATTG TCCCGTAAGC TGAAAGCGAT ACAGGCTTTA CGTGCGGAAG GTGTGACCGT GTGGGTAAGA GCAGTGGCGC TGGATGATGC AACCGCAGTA AATACATTGA TGGCTGAAAT CAGGACGTCG CTGGGTAATA TTGGCGGCGT ATTGCATTGT GCGGGTATGG TAGACCTGGA GAACCCGGCT TTTATCCGGA AGTCAGTGCA TGCTATCAGA GAAGTACTTG TACCGAAAGT AGCAGGTTTA CGGTCCTTAT TTCAAAGCGT CAGTAAAGAC CCTTTACAGT TCTTTGTGTT GTTTTCATCT GTGGCGGGCA TCATCCCCAC CTTAGGTGCA GGACAGTCTG ATTATGCGAT GGCAAATGCT TATATGGACT ATTTCGCGGC GGCTGCCCAG GCATCATTCC CCGTTGTCAG TATACAATGG CCCAGCTGGA AAGAAACCGG CTTCGGGGAA GTAAAAAGTC CTGCATATCA ACAAACAGGA TTGATCAGCC ATAGTAATGC AGAAGGTCTG TTATTGCTGG AGCAGGTGAT CAGTGGCGCT TATGGTCCGG TGATATTACC TGCTATAGTA GATACGAGTC GCTTTAAGCC GGAAACATGG CTTGAATATC CAAAGAGAGT AATGGCAGTT AGCCAATCAC AGCATACCGA ATATGTAGCT GTGTCGCCAA TTAATGAAGG CGATCTTACT ACGGTTGTGG AAGGGTGGCT GATGAATTTG CTGGCAGCAG AATTAAGAAT GGATGTTTCC AGGTTGCGCA GAGACAAAGA GTTTCAGATA TACGGGGTTG ATTCGATCAT TCTCGCGCAA CTGGTTAGCA AGATAGACCA TCAGTTTGAA ACGATTCACC TGGATCCTTC GGTCTTCCTG GAGTATCCGA CAATAGCCGG CATGAGCGCT TATCTGTTGG ATAACTATCC GAAGGAAATG GCATCCTTAC AGATTGTAAA TACGGCTACG CCGGTGGTGG AGAATTTGCC AACAACGCAT ATAAAGAAAC GTATAGCAAT AGTGGGGATG GCCTGTCATT TCCCGGATGC AAATGATATA ACTGCTTACT GGGAGAATCT TCGCCAGGGA AAAGATAGTA TCCGGGAGGT GCCTGTATCA CGATGGGACT GGCGACAGCA TTATGATCCG CTTGGTCAGC AGCAGGGGAA GAGTCGTAGT AAATGGGGCG CTTTTTTACC AGAGATTGAA GCATTTGATC CTGCGGCGTT CAATATCGCT CCGGCGCTTG CTCCTTATAT TGATCCCATT CAGAGACAAT GGCTGGAAGT CAGCACTACG GCTATAGCAG ATGCCGGATA TGAGAAGGAG GCATTGTGGG GAAAACAGAT CGGTGTATTT GCAGGAGCAA GGGCAGGCAA TTTCGCCTAC AAGTATAATA GTCCGGTGAA GGATCGTATT GTAGGAACAG GACAGAATTT TATTACCGCA CATTTGGCAC ATATCTACAA TTTTAAAGGC CCCAACATTG TAGTCGACAC CGCTTGTTCA AGTACTCTGA CTGCTGTTCA TCTGGCTGTG AAAAGTATTC TTTCCGGAGA GAGTGAAATG GCACTTGCCG GTGGTGTAGA TATTCTGCTG GATGAAGGTG TTTTCATCGG TTTAAGTGAT GCCGGCGTAC TGTCAAAAGA CGGTCGTTGC CGCACTTTTG ATGCGGGGGC TGATGGTATC GGATTAGGAG AGGGATGTGG TGTACTGGTG CTGAAACCAC TGGATGCGGC TATCCGGGAT AATAACAAGA TATACGGTGT GATTGATGGT TCAGCCATTA ACAATGATGG CAATACCATG GGTGTTACAA CGCCTAATCC TGAAGCACAG CGTAGTCTGA TTGCTGCTGC CATACAAGAT GCGGGAGTGC TACCCTCCAC TGTTTCCTAT GTTGAAACAC ATGGAACAGG TACACTGATT GGTGACCCGA TCGAACTGAA AGCATTGACA CAATTGTTTT CCCAATACAC GGATCGTAAA CAATATTGCG GTGTAGGTAG TGTGAAAAGC AATATAGGAC ATCTTTTAAG TGCCGCCGGC GCCGCCAGTA TTGTGAAGGT GTTATTGTCT ATTGTACATA CACAAATTCC TCCCACATTA CATTGTGATC ATCCTAACCC CCGTTTTAGT TTTGACGCTT CTCCATTTTA TCCTGTGCGG GCATTGCAAC CCTGGAACGG GCCTGATGGG ATATGCAGGG CAGGTATCAG TTCATTCGGA TTGGGAGGTA ATAACGCCCA TCTTATCATC AGCAATGAAG GTGTGCCTGC CAGTCATATC GCTACTTTAC AACCACGGTT AAAACCAGTC CGATTCAACA GGAAACGCTA TTGGCCGGAA GATGTTGTTA ATAATTCCCA ACAGCAGATG CCCGCTCCGG TATCGGTAAC TACAGCAACA GAAGCTGTAG TAAATGATTT TATGAAACTA TTTGAAGTAA AGGAGGTGTA A
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Protein sequence | MDSLAILKAL STGAISAGAA REALKQLAAA PVSVTPEIDR RPTPEPIAII GMSGRYPDAP DVKTYWNNLV AGKNAVREIP LSRWDVPSFY DPRPLQKGKV YCKWLGMLDD IAEFDPLFFS LSPGEAEWMD PQHRIFLQEA YKAFEDAGYA GEVLNEQKCG VYLGIMSNEY AFLQHQLQPG IAGATGNSYS IAAARIAYFL NLKGPAIAVD TACSSSLVAI HLACQALRNR ETDMALAGGV SLYLTPESYI SMCSAGMLSK DGQCKAMDNS ANGFVPGEGA GAVILKRLKD AEADNDNILG VIIGSGINQD GRTNGITAPS MNSQAALLRD IYAGYKIHPE TISYVELHGT GTKLGDPIEL EALSTVFREH TSRPHFCGLG SVKSNIGHTS AAAGVASVQK VLLSMHSQAL PPTLHVTRPN EHFKFEQSPF YICDTLRPWD SRGERRRAGI SSFGFSGTNA HLVVEEYQPV PKIRPTESIS VLASVFVLSA KTEEQLKVYA GIMRQFLEAH TTLNFTDLLY TLQIGRDAMD YRLAFAAAGI ADAIGKLSAF LNGHNNGSFF TGQLSGKAAP ANGNGATLSR LWANGASVDW QVFYEKVKPR RISLPTYPFA KEVYWIAASE QKQPVQERPY RIIHKTWEEQ VINTSNAFHG KLLVLATTPM LSLANEIKRQ YNDIDIIDPV SSALPEGGMP AAYTGLIDLT GCDEAAEQAL TGLALLQQLI SAGNRPLTMI GVTQGLETIG GKSSGQTGAL RAGLFRMLQA EYRYLNAIHL DIEKEGSTAL QAAHILSELR VAGIHPEICI REGKRYRAVL TAKKIEKDIN IPAFPAGGVL LVTGGTRGIG LECARHFVKK YGARKVVLTG REALPPEEQW SVLLQSDSVL SRKLKAIQAL RAEGVTVWVR AVALDDATAV NTLMAEIRTS LGNIGGVLHC AGMVDLENPA FIRKSVHAIR EVLVPKVAGL RSLFQSVSKD PLQFFVLFSS VAGIIPTLGA GQSDYAMANA YMDYFAAAAQ ASFPVVSIQW PSWKETGFGE VKSPAYQQTG LISHSNAEGL LLLEQVISGA YGPVILPAIV DTSRFKPETW LEYPKRVMAV SQSQHTEYVA VSPINEGDLT TVVEGWLMNL LAAELRMDVS RLRRDKEFQI YGVDSIILAQ LVSKIDHQFE TIHLDPSVFL EYPTIAGMSA YLLDNYPKEM ASLQIVNTAT PVVENLPTTH IKKRIAIVGM ACHFPDANDI TAYWENLRQG KDSIREVPVS RWDWRQHYDP LGQQQGKSRS KWGAFLPEIE AFDPAAFNIA PALAPYIDPI QRQWLEVSTT AIADAGYEKE ALWGKQIGVF AGARAGNFAY KYNSPVKDRI VGTGQNFITA HLAHIYNFKG PNIVVDTACS STLTAVHLAV KSILSGESEM ALAGGVDILL DEGVFIGLSD AGVLSKDGRC RTFDAGADGI GLGEGCGVLV LKPLDAAIRD NNKIYGVIDG SAINNDGNTM GVTTPNPEAQ RSLIAAAIQD AGVLPSTVSY VETHGTGTLI GDPIELKALT QLFSQYTDRK QYCGVGSVKS NIGHLLSAAG AASIVKVLLS IVHTQIPPTL HCDHPNPRFS FDASPFYPVR ALQPWNGPDG ICRAGISSFG LGGNNAHLII SNEGVPASHI ATLQPRLKPV RFNRKRYWPE DVVNNSQQQM PAPVSVTTAT EAVVNDFMKL FEVKEV
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