| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5279 |
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| Symbol | |
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| ID | 8361456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6695041 |
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| End bp | 6696039 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967427 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003124911 |
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| Protein GI | 256424258 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.100381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC AGGATATCCG GAAAAGATTG GAAGATTTCA GAACTGGTAA ATTAACCTCC
GCACAAAAAG AGGAATTACA GCACTTGCTT GACGCTCTCT CAGAAGAGGA GCAGACGGCT
TTATTTCCCG TGGATGCTTA TTTACAGAAA GGAGATCACC AGTTACCGGA TGAAGAAGTA
GCCGCTGCGC TGGCTCGCCT GAAACAAACC GTAAAACCAG GCAAAGTAGT ATTCCTGGGT
GGCTGGAGAA AAGTGAGCAA GTATGCCGCT ATCCTGGTAC TCGTAATGGG AAGTACTTTC
CTGCTGAGAA AACAGACCGG TCTTTTTGTA AAAAAAAGCG GACAGACAGC CAAACGTTAC
CAGGTCATGA AAGTAGCAGA TGGCAATCAT GCTACCCTGA TGCTGAAAGA CGGTACGCGT
ATCGTTATCA ATGGCGGTAG TGAATTGTTA TATCCGGAGA ACTTCGAAGG CGCTGAGCGT
ATGGTCGTAT TGAAGGAAGG GGAGGCCTAT TTTGATATCG CAAAAGATGC AGCGCATCCG
TTCGTCGTAA AAACACAACA AATGAGAGTG CGGGTACTGG GTACCTCATT CTCTGTAAGA
GATTATAAGG AAGAAACACG CGCCTCCATC TCTGTGAACA GTGGAAGGGT CGCACTTGAA
AGCCTGTTAA AGACAGGACC ATGGCTTGAA CTCAATGCCG GCAATGGATC AATAACAGAT
AAATACGAAG GGACAATTAC CAAACACGAT ATCGATGTTT CAGCCACCAC TGCGTGGATA
AGAGGAGAGT TTAATTTCCA TGACGCCGCT TTACAGGACG TATTACAGGT ACTGCAACAT
AAATATGCAG TACGCTTTGA AGTAAGAGAT TCAACATTGC TGAAACGCAG ATTTACAGCA
ACATTCAGAA ACAACAGTAT TCAGAACATC ATGCAGCAGT TGAAGCTCAT GGGTAACATC
GATTATACTA TTACAGACAA CCTAATATTA ATACAATAA
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| Protein sequence | MDLQDIRKRL EDFRTGKLTS AQKEELQHLL DALSEEEQTA LFPVDAYLQK GDHQLPDEEV
AAALARLKQT VKPGKVVFLG GWRKVSKYAA ILVLVMGSTF LLRKQTGLFV KKSGQTAKRY
QVMKVADGNH ATLMLKDGTR IVINGGSELL YPENFEGAER MVVLKEGEAY FDIAKDAAHP
FVVKTQQMRV RVLGTSFSVR DYKEETRASI SVNSGRVALE SLLKTGPWLE LNAGNGSITD
KYEGTITKHD IDVSATTAWI RGEFNFHDAA LQDVLQVLQH KYAVRFEVRD STLLKRRFTA
TFRNNSIQNI MQQLKLMGNI DYTITDNLIL IQ
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