Gene Cpin_5266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5266 
Symbol 
ID8361443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6669257 
End bp6669529 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content48% 
IMG OID644967414 
Producthypothetical protein 
Protein accessionYP_003124898 
Protein GI256424245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0028842 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAAC AGCAAACCTG TCAACACATC AGAGATATCA AAGAAGTGCA AATAGGCCAG 
GATGGCGTAT GTGAGGAATG TATCAAAAAC GGGGGCGACT GGGTGCATCT GCGTACCTGT
CAGACCTGTG GTGAGACCCT TTGCTGTGAC CAGTCACCTA ATAAACATAT GACACGTCAT
CATCATGCTA CAGGGCATCC GGTGGTGGCT TCGGCGGAAC CTGGTGACCG ATGGTTGTGG
TGTTATCCTG ATAAACTGTT TGTAGAATAT TAG
 
Protein sequence
MQEQQTCQHI RDIKEVQIGQ DGVCEECIKN GGDWVHLRTC QTCGETLCCD QSPNKHMTRH 
HHATGHPVVA SAEPGDRWLW CYPDKLFVEY