Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5173 |
Symbol | |
ID | 8361350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6454728 |
End bp | 6455546 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967321 |
Product | hypothetical protein |
Protein accession | YP_003124805 |
Protein GI | 256424152 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.334209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0119948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAA ATGACTGGAC AAACGATAAA TTGTTCGAAC GGTTAATAAA TAACCAGTCC ACCCGTACCT ACTGGGAGAA TATCAAAACA TTGTGTTCCC GCCCGGAAAA AGCTGTCTTT AAACGTTGCG CTACGCTGAC CAGGTCAAAG GTCCCACGCG AAAGACGTAT AGGGATAGAT GTACTTTCAC AACTGGGTGG CGCAGCACGT CCTTATCAGG CGGAAACACT GGCATTGTAC GTTCGTATCC TTCCTGAAGA AACCGACCTG AAAGTCCTGG AATCCTTATT ACATGCGATC GGTCACAACA ATACAGGAAT GGACAATCAT AGCGCTGAAA AACTGGCCGC ACTAAAAACA CATCGCTATG CAGTCATAAG GTTTGGCGTT GCCTGCGCAC TGAAAGGCGT TGACAAACCT GCCGCTATCG ATACACTGAT TACGCTCTCC GCCGATAAAG ACACGGATAT CCGTGACTGG GCCACCTTTG CACTCGGCTC ACAGATCAGC AGAAATAATA AAGCCATCCG GGAAGCCCTC TGGGCCAGAA CCAATGAAGC GAATGAGGAT ACCCGCATGG AGGCGATCGT CGGACTGGCA CTCCGCAAAG ACCTACGCGT AATGGACCTG ATCCGCAAAG AATTACAAAG GGGCGATGCC GGCACATTGT TATTTGAAGC CATTACTGAA CTGGGTACCA AAGAGTTTCT GCCTGATCTC AAAAAGCTGC ATAAACAATC AGCCAACGAT ACCAGCATCC ATCCTACCTG GAGGATGAAA CTGGAAGAGA CCATCGCCAC ATTGCAGTTA TCGGCCTGA
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Protein sequence | MSRNDWTNDK LFERLINNQS TRTYWENIKT LCSRPEKAVF KRCATLTRSK VPRERRIGID VLSQLGGAAR PYQAETLALY VRILPEETDL KVLESLLHAI GHNNTGMDNH SAEKLAALKT HRYAVIRFGV ACALKGVDKP AAIDTLITLS ADKDTDIRDW ATFALGSQIS RNNKAIREAL WARTNEANED TRMEAIVGLA LRKDLRVMDL IRKELQRGDA GTLLFEAITE LGTKEFLPDL KKLHKQSAND TSIHPTWRMK LEETIATLQL SA
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