| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5172 |
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| Symbol | |
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| ID | 8361349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6452064 |
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| End bp | 6454544 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967320 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124804 |
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| Protein GI | 256424151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00698438 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACTTCA AAACATTATT GCTCAAAGAC GCAATAGCAC AAAAATTGTT AACCTCTCTG
GCGGCCGACT TCGACTCCCT CATGAAAGAA TCAGAAGAGC TGTTTGTCAG AATTTACGAG
GGGGACACTG TTCTGCATGA ATCGATTGAC CTGTACGACC TCTTTTATGA AGAAAACGTA
GCCGGCATCA TTGTAAATGG CAACCTCACG GTCAATGGTA CCATTATCGA CTACGAGCTT
GACACCTATT CCTGTTTCCT GCAGGTAAAA GGTTCCCTGA GCTGTCATAC TTTGGCATCC
GGATGTGCAG AAATACTGGT AAGCGGTGAT GCCAATGTCA CAGAAGCACT CGTAGCCTTT
TACAATCACG GTACCCTTGA AATTGACGGT GACCTGCACG CAAGACTATT GGTCGTAGAC
GATCATGGTA TCTCCATCTA TGGCAAAACC AACGCAACTA CCTATTGCCG CGGATGGCAC
ATCAAAGGCG GTGCAGATTA CACCGACTGG CGGGATATCC TCTTACCGGA AGTAGCAGCT
GAACTGCTGG ATGAAAACGA TTATCTCTTT GCCGGCGATG TCCGCCTGCT GAAAAAGCTG
CAGGACCAGG ACACTGTCTT CAAAAAAGAA GCAGGCAATT TCTCTGCGGA GCATAACCCT
GTTGCCAGAG TCGTCACCTG GAAAGAGATC AAGCCCCTCA TTCAAGACCT GAAATGTGAA
TACGAGGAAT ATCCTTTCGC CATCGCCGAA AAACAATCTG AACAGGAACT GGGAAAGGAA
AAATTCCTCC TGTATGAAGG CAGGACCATC CTCAATGAAC TGGATCTGGT AACCGAAGAA
TACATGGGGA TCATTGTTAT CGGCGACCTC CATGTAAAAG GCAGTATAAT CAGTGAAGAT
ACAGATGGCG CTATCTCGCT GATCGTACTC GGTAACCTGA AGGCGAAGAA CATGTGTGTC
GGCGGACAAC TCATCTACAT CACCGGTTAT CTCGCTGTTG AAGAGATGAT CATGGGTATC
TACAACCATG GTGAAATGTA TGCCCAGTCG TATGTGTGGT GTCCTGTAGT CATCAATGAC
GACTATCACT TCTACTTCAC ACACCTGGCT GGTGTTAAAA TTCTTGAGTT TACGGATGAC
AATGATAAAG ACATTATCAG GGAAAAACTG ATTGAAGAGC TGTTTGATGA AGAAGAATGG
TTTGTCTATT ACAGTGTTAT CCGTGAAGGC AAACCTTTGC TGAAGGAACA GCCTTCGCGT
AACATCATTA CCAAAGAAGA CCTGGCCAAC CTGATGAATA TTCCCCTGTT CGGGCCTCAG
TCCTACAACT TTGCTTTCAG CGAAGACGAC TGGTATATCA GCGTAGACAG AGGTGGGTAC
ATCGACGACG ACGGCGAACC CGTCGCTACC TCACTCATCG CGATCAACAG CGAAAAGAAC
CGCTATCTCA TGTGGTACAT GGAAGAGGAC GAGACCATCA GTACACTGGT GAAAGATGCC
AACGATGAAT GGATACCGGC ACAACCTAAA TGGAGAAGCT GGATCGCAGA ACAGTTTACC
GCTGTCGAGA CAATCATTTT CCGGAAAGTA CGCTGGAATA ACAGGCACAT CAAAGTCATC
AATAATGAAG AACTCTGGGC ACTGATCTGG ATGTTCAGAA ATGACCAGGA TGATGATGAA
TTCCGCGGAA TCGCCAATGA AGTATTTACA CGCGTAATAC ACGGCGCCCT CTTCCCTTTT
GCCTATGTCT ACATCACATT CGCTGAAAAC AGTGAAGAAC GTGGGCTGGC ACAAAGTCCG
GAAGCGATAC ATAGAGTAGC ATTGCTGGAC GGTCTGATCG CAAACGGCCT GATCACAGAA
GTCTCCACTG AGGGCCCGCT GGCAGAAAGA GTAGCAGCAC TCAATATAGT GACAGAATAC
ACCTGGGGGT ATAGTCCCGA ACTGGATGAA AGTTACGAGG ACAAGCCGAT CGACAGAGCT
TTTATATGCA AAGAGAACGA AGAGTTGCTT TGTGTCAATG GTGCATTACT GCGACTGGAT
ATAGGCACAA GGTCCTATAT TCTTGGGGGT ATGAACCTCG ATGAAATAGA TCTGGCCACA
GAGCGGATGC AGGCATTGGG TATCAATGCC AAATATTTCA CTGCCGCAGA TGAAAAAGAA
GAAGCGTCGC TGAAACAAGT GGCTGCTGCA ATGCTCGCCA TCGCCAAAGA AAATAACACC
GAAGCCCTGC ATCTGTTGCG TGACCGTGCG CCTGTATTAT GGAACTACTT GTATAATGAG
CGTGGTGACA TCGCTTTCTG GCAGGAATGG ATAGATGACT TTAAATCCTG GCTGATCCTT
AAAGCAGGTT CTTCCCATAC ATTTAGGGGA GAAGAAAATA TTCCGCCTTT ACACCCTGAT
GTGGAGTTCT GGATAGACTG GTGCGAAAAA TATGATGTGA TAAAGGAAAC TTCTGACACC
TCCGTTCCGG ATGAAGAGTA G
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| Protein sequence | MNFKTLLLKD AIAQKLLTSL AADFDSLMKE SEELFVRIYE GDTVLHESID LYDLFYEENV
AGIIVNGNLT VNGTIIDYEL DTYSCFLQVK GSLSCHTLAS GCAEILVSGD ANVTEALVAF
YNHGTLEIDG DLHARLLVVD DHGISIYGKT NATTYCRGWH IKGGADYTDW RDILLPEVAA
ELLDENDYLF AGDVRLLKKL QDQDTVFKKE AGNFSAEHNP VARVVTWKEI KPLIQDLKCE
YEEYPFAIAE KQSEQELGKE KFLLYEGRTI LNELDLVTEE YMGIIVIGDL HVKGSIISED
TDGAISLIVL GNLKAKNMCV GGQLIYITGY LAVEEMIMGI YNHGEMYAQS YVWCPVVIND
DYHFYFTHLA GVKILEFTDD NDKDIIREKL IEELFDEEEW FVYYSVIREG KPLLKEQPSR
NIITKEDLAN LMNIPLFGPQ SYNFAFSEDD WYISVDRGGY IDDDGEPVAT SLIAINSEKN
RYLMWYMEED ETISTLVKDA NDEWIPAQPK WRSWIAEQFT AVETIIFRKV RWNNRHIKVI
NNEELWALIW MFRNDQDDDE FRGIANEVFT RVIHGALFPF AYVYITFAEN SEERGLAQSP
EAIHRVALLD GLIANGLITE VSTEGPLAER VAALNIVTEY TWGYSPELDE SYEDKPIDRA
FICKENEELL CVNGALLRLD IGTRSYILGG MNLDEIDLAT ERMQALGINA KYFTAADEKE
EASLKQVAAA MLAIAKENNT EALHLLRDRA PVLWNYLYNE RGDIAFWQEW IDDFKSWLIL
KAGSSHTFRG EENIPPLHPD VEFWIDWCEK YDVIKETSDT SVPDEE
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