| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5116 |
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| Symbol | |
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| ID | 8361292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6385223 |
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| End bp | 6388402 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967264 |
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| Product | Licheninase |
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| Protein accession | YP_003124749 |
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| Protein GI | 256424096 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0998931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC CGGTTTACCC AAACAAAAAG GTGAAAAAGA GTCCATGGCT TGCAACTGTG
CTCTGTCTTT CACTCTTACC AGTTTCCACG TATGCCCAGC GAACCCTCGT CTGGGAAGAA
AGTTTTACCA GTCCAACCCT TAATGCGCAA ACCTGGACCT ATGAGACAGG TGATGGTTGT
GCCAAGGGCA ATTGTGGCTG GGGCAATGCG GAGTTGGAAT ACTACACCAA CCGCACAGAA
AATGTCAGAA TTGAAAACGG TCACCTGGTG ATCGAAGCGC GGCGGGAAGA TATGGGCGGT
AAGCCTTTTA CTTCCGGTCG TATCAAAACA GCCGGCAGGG TTACTTTCCG CTACGGCTCA
CTGGAAGCAC GCATCAAAGT ACCGAAGGTC GGGAACGGTT TATGGCCTGC TTTCTGGTTG
CTGGGCGCCA CAGGTGGCAC CTGGCCGCAC AACGGTGAAG TAGACATCCT CGAAATGGGT
TTTGCGGGCG CTATTGCAGC CGGCAGACCA AACAACACGG TGAGTGCAGC TACTCACTGG
TGGACGGAAA ATCCGGGTGG CTATACCGGT CATGCCACCT ATGCAAAAGA TACCGTTGCT
ACAGGCGTTG ACCTGGGCGA CGATTATCAC CTCTACAAAC TGGAATGGGA TCCGCAATTC
CTGACTATTT TCCTGGATAA TAGTCCGTAT TACAAAATTG CGATCAACGG CGGAAACGGC
TTTGAAGCCT TTCATAATCC GTTTTACATC CTGCTGAACC TTGCTGTCGG CGGTAATTAT
CCTGGTATTC ATTCTGCAGC AGGGATTACT GCGCCCTTAC CCGGACGGAT GGAGGTTGAT
TACATCAGGC TTTATCAGGA TCCCCGGCAG GGAGAAGAAC TGATACTGGC GAGCAACAAT
GCACCGGAGG GCAATTATGG TATTTTCACT GACAATACCA CTGTCAGCGA CAGAGTTGCT
TTTGGTCAGG GCGCTAACCT GTATCTCTGG AACAACATCA CCAACATCAC CTCTCCTACC
CCTTCACCGT TTGAGGGTAG CAATGTATGG GCTTTTCATG CCAATGCCGG CGCCTGGTAT
GGTCTGGGTG TGGCGAATGA CATGAAAAAT ATGAGTAACT ATTCGGGCGG TAGTCTGAAG
TTCCATATGA AGACCAGTTC CACCGCTACC TTCAAAGTAG GTATTGCTTC GGATGGCGCG
GAAGGCTGGA TCACGTTTAA CGGCAGTAAT GAGCATGGTC TTGTCAGAGA CGGACAATGG
CATGAAGTCA CGATTCCGGT GAGTGAATTC GGTGCGCTGG ATCTGATGCA GGTCACACAG
TTGTTTATGT TCTCCGGTGA TGCACCGGCG GCGGCAGCTG ATTTCTATTT TGACAATATC
TATTACACCG GCGGTGTATC TGCGAATCCG GCGCCGAAGG TCGCCATTAC CAATATTGCC
AATGAGGCGG TGTATACCAC ACCTGCCGCT ATTGCGATAC AGACGAATGC CAGCGACCCG
AATGGCAGCA TCAGCAAGGT GGATTTCTAT AATGGCGCCT ATTATCTGGG CACCACAACC
ACCGCTCCTT TCAATTACAC CTGGAATACC TCCACACAGG GTATCTACAA GCTGATTGCC
AAAGCGACTG ACAATCAAAA TAAAATGACC ACTTCGCAGC CGGTCACCGT ACTGGTAGCG
GCACCGGGTA ATACCGCACC GCAGATCAAT ATTACTTCCC CTACTGCCAG TACGCCTTAT
CGCAAACCGG CCAAGGTGAT GATCAATACC AATGTTACTG ACAACGGCAT TATCTACAAA
GTGGAATTCT TCAACGGCAG TACCTTACTG GCGACACTGA CGCAACCACC ATTTAACTAT
ACGTGGGAGA ATGTGCCGCA GGGTACGTAT ACCATCACGG CGAAAGCGAC AGATAATGGC
AAGCTGAGTA CGACTTCTGC CCCGGTGACG ATCACGGTGC AGGACAACAA GATCCTTTCC
AGCAAATATG GTATCTACAG CGAAGATGCT TCTATCACTG AGAAGATGAC CTACGGACTG
GACGCGAACC TGTATATCTG GAATAACCTG GCCACGATCA GTGGTGCGGC GCCTTATGAG
GGGTCACAGG TAATAGCTGT TACGGCAGCA GCCGGCAACT GGTTTGGTTT AGGCGTGGCA
CATGATGTAC GCGATCTGAC GCATTTTGCC AATGGCTCAT TGAAGTTCCA CTTCAAAACA
TCTTACCAGG GTCAATTCCG TTTCAGTATT ATTTCACAGA ACGGTGAGCA GATGATCAAC
TATGCGGCCG GCGAACAGAA ACTGGGATTA CTCAGGGACG GACAATGGCA TGAGGTGACC
ATTCCTGTGA GTTCGCTGAC CAATGTCAAC CTGACGACGA TGTCGCAGGC ATTTACTTTC
TCCGGAGATG CACCGGCGGC AGCGGCGAGT TTCTATATAG ACAACATCTA TTACGTGACT
TCAGATCCTC CGGTTACGCA GACCAACCTG GCATTGAACA AACCTACCCG TACGACTTCC
AACGAGAATA TTGCTATGGA AGGAAAGTAT GCAGTGGATG GTAATATCAA TACCCGCTGG
TCCAGTGGCT TTGGCGATCC ACAATCGATC CGGGTTGACC TGGGTGCTGA TTATGATATC
AACCGCGTGA AGATCACCTG GGAAACGGCA GCCGGCAAAG ACTACATCAT ACAGGTTTCC
AATGATACGA TCAACTGGAG TCCGTTGCGT ACGGTAACCA ACAACAGTAC ATTGGTGAAT
GAGTTTACCG GTCTGACAGG CCACGGTCGT TATCTGCGGA TCTATGGTAC GGCGAGAACG
ACAGTGTATG GCTATTCCAT TTTTGAGCTG GAAGCGTATG GTAGTCTGCG GACAGGAAGT
TCCTTACTCG CCCGTACTGC ACCTGCAACA CAACAATCTG CAGTTACGGC CTGGAAAGCA
ACGTTGTATC CAAATCCGGT AGTCAATGAC AGGGTACAGT TACTCAGTAG TGAGGCAGTG
AAGCAAATCA GGGTGGTAGA TCTCAACGGA CGTACCTGGT CGACACAGCA ATTGTCGCAG
GAAGGCAAGG TATCGTCTAC CTATGGTGTA GATGTAAGTC GTTTACCAGC AGGCGTTTAT
TTCATTCAGT TAAAGAACAA CGCGCAGCAG ACATTATTGC TGAAGTTTGT TAAACAATAA
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| Protein sequence | MKNPVYPNKK VKKSPWLATV LCLSLLPVST YAQRTLVWEE SFTSPTLNAQ TWTYETGDGC
AKGNCGWGNA ELEYYTNRTE NVRIENGHLV IEARREDMGG KPFTSGRIKT AGRVTFRYGS
LEARIKVPKV GNGLWPAFWL LGATGGTWPH NGEVDILEMG FAGAIAAGRP NNTVSAATHW
WTENPGGYTG HATYAKDTVA TGVDLGDDYH LYKLEWDPQF LTIFLDNSPY YKIAINGGNG
FEAFHNPFYI LLNLAVGGNY PGIHSAAGIT APLPGRMEVD YIRLYQDPRQ GEELILASNN
APEGNYGIFT DNTTVSDRVA FGQGANLYLW NNITNITSPT PSPFEGSNVW AFHANAGAWY
GLGVANDMKN MSNYSGGSLK FHMKTSSTAT FKVGIASDGA EGWITFNGSN EHGLVRDGQW
HEVTIPVSEF GALDLMQVTQ LFMFSGDAPA AAADFYFDNI YYTGGVSANP APKVAITNIA
NEAVYTTPAA IAIQTNASDP NGSISKVDFY NGAYYLGTTT TAPFNYTWNT STQGIYKLIA
KATDNQNKMT TSQPVTVLVA APGNTAPQIN ITSPTASTPY RKPAKVMINT NVTDNGIIYK
VEFFNGSTLL ATLTQPPFNY TWENVPQGTY TITAKATDNG KLSTTSAPVT ITVQDNKILS
SKYGIYSEDA SITEKMTYGL DANLYIWNNL ATISGAAPYE GSQVIAVTAA AGNWFGLGVA
HDVRDLTHFA NGSLKFHFKT SYQGQFRFSI ISQNGEQMIN YAAGEQKLGL LRDGQWHEVT
IPVSSLTNVN LTTMSQAFTF SGDAPAAAAS FYIDNIYYVT SDPPVTQTNL ALNKPTRTTS
NENIAMEGKY AVDGNINTRW SSGFGDPQSI RVDLGADYDI NRVKITWETA AGKDYIIQVS
NDTINWSPLR TVTNNSTLVN EFTGLTGHGR YLRIYGTART TVYGYSIFEL EAYGSLRTGS
SLLARTAPAT QQSAVTAWKA TLYPNPVVND RVQLLSSEAV KQIRVVDLNG RTWSTQQLSQ
EGKVSSTYGV DVSRLPAGVY FIQLKNNAQQ TLLLKFVKQ
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