Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5083 |
Symbol | |
ID | 8361259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6327935 |
End bp | 6328813 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967231 |
Product | NmrA family protein |
Protein accession | YP_003124716 |
Protein GI | 256424063 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.624172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.697102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACAC AAGGACCAGC TACTATTCTT ATTACCGGGG CTACGGGCAA CATCGGTAAA GAACTGATCA ATTTACTGTC TGCAAAAGGG ATCTCTTATA ATGCAATGGT ACGATCCATA GAGCGCGCCA AGGAACTGGA AGTATTACCC GGTATTACAT TGGTACAGGG GAATTTTGAT GATGAAGTCT CGCTGGATAA GGCATTGAGA GGTATAGAAA AGGCATTTCT GCTGACTAAC TCTTCTGAAC ATGCAGAAGA ACAACAGCTC CGCTTTGTTA ATGCCGCCAA AAGAGCTGGT GTAAAACATA TTGTGAAGTT GTCCCAATGG GCGGCAGATG TCAGTTCACC TGTACGCTTT CTGCGTTATC ATGCCGCTGT TGAAGCTGCT ATAACAGCTG CCGGTATGAC ATATACCTTC CTGCGCCCTA ATCTGTTTAT GCAGGGACTA TTAGGCTTTA AGGAAGTAAT CCGGTCAGAG CACAAATTTT TCGCTGCTGC CGGTGAAGCA AGAATCTCCC TCATCGATAT AAGGGATATC GCAGCAGTAG CAGCCGTTGC GCTGACGGCA GACGGACATG AAAATAAAGT CTATGACCTT ACCGGCCCCG AATCATTGAC ACATCAGCAG CTGGCAACCA CCTTCTCTCA GGTACTCGCG CACCCGATAC ACTTCATTAA CGTGCCGGAA GAGGATATGA AAAATGCACT GCTGGGTGTC GGATTTCCCG AATGGCAGGC AGATGGTTTG TTGGAAGATT ATGCGCATTA CCGGCTCAAT GAAGCGGCTG CAGTGACAGA TATCGTGCAG GATGTAACAG GCGAGAAAGC CCGTACATTT AGTCAGTTCG TAACAGATTA TGCGTCTCTG TTTAAATAG
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Protein sequence | MSTQGPATIL ITGATGNIGK ELINLLSAKG ISYNAMVRSI ERAKELEVLP GITLVQGNFD DEVSLDKALR GIEKAFLLTN SSEHAEEQQL RFVNAAKRAG VKHIVKLSQW AADVSSPVRF LRYHAAVEAA ITAAGMTYTF LRPNLFMQGL LGFKEVIRSE HKFFAAAGEA RISLIDIRDI AAVAAVALTA DGHENKVYDL TGPESLTHQQ LATTFSQVLA HPIHFINVPE EDMKNALLGV GFPEWQADGL LEDYAHYRLN EAAAVTDIVQ DVTGEKARTF SQFVTDYASL FK
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