Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5070 |
Symbol | |
ID | 8361246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6315051 |
End bp | 6316664 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967218 |
Product | Alpha,alpha-trehalase |
Protein accession | YP_003124703 |
Protein GI | 256424050 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1626] Neutral trehalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.379512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGAA AACTTTTGCT CATCACCGGG GCTATAGCCA GTTTTATGGC CTGTAAGCAC CAGGAGCAGC CACTTGTAAA AGAACGTTCC CCACGTCAGG AATTCCCCGG ATTATTTGAA GAGGTACAGA CAGCGCGTAT CTTCCCGGAC AGTAAAACAT TCGCAGACTG TGCGCCAAAA GCTTCGCCGG CCAGCGTACT GCAATCTTAT GCAAAAGAAC GTACTGCCGT TGGGTTTGAC CTGTCGACGT TCGTACACAA TCATTTTTAC GTACCGGCTG CCGCAACCTC CGCTTATGTA ACGGATACCG CCCAGGACGT GATCGCTCAT ATCGAATCCT TGTGGAATGT CTTAAAACGT TTACCGGATA CCGCTAATAC CTGGGGTTCC CTGATACCGC TGCCAGATCC TTATGTGGTG CCGGGGGGAC GTTTCCGTGA GGTCTACTAC TGGGACAGCT ATTTTACCAT GTTAGGACTG AAAGAAAGCG GCCGGATCGA TCTCATAGAG CATATGATTA AAAACTTCGC TTACCTTATC CGCACATACG GCTTCATTCC CAACGGCAAC CGCACCTATT ACCTTACCCG CTCTCAACCG CCTTACTTCG CACTCATGGT ACAATTGCTG GTATCGGCAA AAGAAGACCA TAAACAGGAG ATCCTGACCA CTTATCTCGA CGTCCTTGAA AAGGAGTATC ACTTCTGGAT GAAAAAACCT ACTGAAGGAC AACATACTGC AGAACACCTG ATTACGCTGA AGGATGGTAC GACGCTAAAC CGTTACTGGG ACCGGGGAAC CTGGCCAAGA GAAGAATCCT GGCGGGAAGA TATCCTGACC GCTAAAAAGT CGCCTTTACA TGATGCCGTG TACCGCGAAC TCCGGACCGG GGCAGAATCG GGCTGGGATT ATAGCTGTCG CTGGTTTGAA GACGGAAAAT CACTGGAAAC CATCCATATT ACAGATATCA TCCCCGTTGA TCTGAACTGC CTCCTGTATA ACCTGGAGCA GACCCTTGCC GATGCCTATA ACATGAAAGG CAATACGCTG AAAGCCCTGC AATACGAATC CGCTGCCGCT ACCCGCAGAG ACGCCATTCT CCGTTACTGC TGGGATCCGA AAACAGGTTT CTTCCGGGAT TATGATTTTA AGAAAGAAAA GAGAACATCT GTACTAAGCC TGGGTGGCAT GTACCCCTTC TTTTTTGGTA TTGCCAGAGC AGGTCAGGCG GATAGTATGA CCCTGGTGTT GCAGAAAGAA TTTCTGTATC CCGGCGGACT GGTCTCCACA CCTTTCGAAA CCGGCGAGCA ATGGGACGCA CCTAATGGCT GGGCGCCGCT GCAATGGATG GCTATCAATG GACTACTCAA TTATGATAAA ACAACCCTGG CCTCAGAAAT TGCAGATCGC TGGTCCCGTC AGAATATCAG GGTATTTAAA CAGACTGGTA AACTACTTGA AAAGTATAAT GTAAAAGATA CCTCGCTGAC AGGAGGAGGG GGCGAATATC CCAACCAGGA TGGATTCGGA TGGACAAACG GGGTGCTGTT GAAAATATTG CATATGCAAC AGCAGGGACT ATTGAATAAC GGAAAAAATA TTGATACCTT ATAG
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Protein sequence | MNGKLLLITG AIASFMACKH QEQPLVKERS PRQEFPGLFE EVQTARIFPD SKTFADCAPK ASPASVLQSY AKERTAVGFD LSTFVHNHFY VPAAATSAYV TDTAQDVIAH IESLWNVLKR LPDTANTWGS LIPLPDPYVV PGGRFREVYY WDSYFTMLGL KESGRIDLIE HMIKNFAYLI RTYGFIPNGN RTYYLTRSQP PYFALMVQLL VSAKEDHKQE ILTTYLDVLE KEYHFWMKKP TEGQHTAEHL ITLKDGTTLN RYWDRGTWPR EESWREDILT AKKSPLHDAV YRELRTGAES GWDYSCRWFE DGKSLETIHI TDIIPVDLNC LLYNLEQTLA DAYNMKGNTL KALQYESAAA TRRDAILRYC WDPKTGFFRD YDFKKEKRTS VLSLGGMYPF FFGIARAGQA DSMTLVLQKE FLYPGGLVST PFETGEQWDA PNGWAPLQWM AINGLLNYDK TTLASEIADR WSRQNIRVFK QTGKLLEKYN VKDTSLTGGG GEYPNQDGFG WTNGVLLKIL HMQQQGLLNN GKNIDTL
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