Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5020 |
Symbol | |
ID | 8361196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6270780 |
End bp | 6271952 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644967169 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003124654 |
Protein GI | 256424001 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.850855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.118195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA CTCCCAGGTC CGCCCGGCTC GCGACCGCTG CCTTTTTCTT CATCTCCGGC TTCAGTTTTT CCAGCTGGGC GTCCAGGATA CCTGATATTC AACGTCAACT TTCCTTAAAC AAGGCCCAAT TAGGCTTCTA CCTGTTTGCA CTGCCGATCG GCCTGGTATT GACGCTGCCG GTTACCGGTT ACCTTTTACA GCGGCATAGC AGCCGGAATA TTATGATGAT CGGGGTATTG GTCTTCAATC TGATGCTGGC AATGATCGGG GTTGTAAATG AGCCCTGGCA GCTGGGGCTG GTGCTTTTCT GCTTCGGTTC CTCCCGGAAT CTGATGAATA TTTCTGTAAA TGCACAATCT GTTGCCGTCC AGGCATTGTA TAATCGGTCA ATAATTACTA CTTTTCATGG AGTATGGAGC CTGGCAGGTT TTGCTGCCGC AGCAGTAGGT GCTGTGATGG TCGATGTGAA GATAACACCG GCCTGGCATT TCCTGGTAGT GGCGATATTG ATGACCATCA TGGGTTTTCT GGCATTCCCG GACAGTCCGC ATGAACCGCC CAGGAAACAG GCCGATACCA AACGTTTTAT CTGGCCCGAC AAACACCTGA TGAAGTATGG GCTGATATCA TTTGCCGTCA TGGCATGTGA GGGGACAATG TACGACTGGA GCAATATCTT CTTCCAGGAA GCAGTACATC CGCCGGAGAA ACTGATCGCC GCCGGCTATG TCATTTACAT GATTGCCATG AGTACCGGAC GTTTTACCGG AGACAGGCTT GTCAACCGCC TGGGTATACC AACCATGATC AGGTACAGCG GCATACTGGT TCTCTGCGGA TTCCTGGTGT CAGCTGTGTT ACCGCATACG CTCTCTGCCA GTATCGGTTT TATGATGATC GGTTTCGGTG TTTCCTGTGT GGTGCCGCTG GTACTGCGGA TGGCCACTAT GAACACCAGC TTGAGCAGTG GTGCTGCCAT TGCGGCCGTC TCTACCGTAG GCTATATGGG ATTCCTGGTG GTACCGCCTG TAGTCGGTTT TCTGGCCGAA GGTTTAGGTA TCAGATGGGC ATTCGCCGTA ATGGCCCTTT TTGGTGTACT GATCACCGTC CTGATATTAC AGATAAAAGA AACAACACAA AAAACTACAT TAACAGATAA TCTAAAATCG TAA
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Protein sequence | MTTTPRSARL ATAAFFFISG FSFSSWASRI PDIQRQLSLN KAQLGFYLFA LPIGLVLTLP VTGYLLQRHS SRNIMMIGVL VFNLMLAMIG VVNEPWQLGL VLFCFGSSRN LMNISVNAQS VAVQALYNRS IITTFHGVWS LAGFAAAAVG AVMVDVKITP AWHFLVVAIL MTIMGFLAFP DSPHEPPRKQ ADTKRFIWPD KHLMKYGLIS FAVMACEGTM YDWSNIFFQE AVHPPEKLIA AGYVIYMIAM STGRFTGDRL VNRLGIPTMI RYSGILVLCG FLVSAVLPHT LSASIGFMMI GFGVSCVVPL VLRMATMNTS LSSGAAIAAV STVGYMGFLV VPPVVGFLAE GLGIRWAFAV MALFGVLITV LILQIKETTQ KTTLTDNLKS
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