| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5006 |
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| Symbol | |
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| ID | 8361182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6258124 |
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| End bp | 6259665 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967155 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003124640 |
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| Protein GI | 256423987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.328138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00378398 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGGA TCATCCTGCT GATCACCGTT ATTGCTGCTG CGGTAATGGA GCTGATCGAC
ACCTCTATCG TCAACGTGGC GCTGTCGCAT ATGAGTGGTA ATCTCGGCGC CACCCTTGAG
GATACTTCCT GGGTGATCAC GGCCTATGCC ATCGCCAATG TGATCATCAT TCCGATCACC
AGCTTTCTTG TCAACAAACT GGGAAGACGG AATTACTATA TCGGTTCTAT TATTGCTTTT
ACGTTCTTTT CATTTATGTG CGGACAGGCC AGCAACATCT GGCTCCTGGT TACATTCCGC
TTCTTGCAGG GTATAGGTGG TGGTGCGCTG CTCTCCGTAT CCCAGGTGAT CGTATTTGAA
TTATTTCCAA AAGAGAAACA GAATATCGCC AGTGCATTAT TTGGGGTGGG TGTTTTCGTA
GGACCGACAA TCGGTCCGAC ACTGGGTGGT TATATCACTG AGTTTTATGA CTGGCCATGG
ATATTCTATA TCAATATTCC TATCGGTATC GTAGCTGCCA GTATCTGTTA TGCGCTGCTG
AAAGAACCGG AGATCAAGGT AAAAGCCAGT AGCATCGACT GGGCCGGCAT CATTCTGCTG
GCAATAGGTA TTGGTTCGCT GCAGACAGTA CTGGAAAGAG GTGAAACGGA CGACTGGTTT
GAAGCCGGAT ATATCATTTT TCTGAGTGTG ACCGCATTCT TTGGCTTGTT GCTGTTCGTA
TGGTGGGAAT TGACCACACC TACCCCCGTC GTCAATCTGC GGGTACTCAA AAGCAGGAAT
CTTAGTCTGG CAGCCGTCAT GACATTTGTA TCAGGCGTAG GGTTGTTCAG CTCTGTATTT
CTGACACCGG TATTTGCACA GCGATTACTC AATTTCACCC CCACGCAAAC AGGCTTGCTG
TTGTTACCAG GGGCGATTCT CGCGATCGGA GGGCTGATCA TCTCTGCCCG GCTGTTACAA
CGGGGCATCT CTCCGATAGT AATGATCACC CTGGGGATGT CCATGTTCAT CCTTTTCAGC
TGGCAGATGT CAGGATATAA CCTGGATGTC AGTGCAAGCG GTCTGACGAA TACATTGATA
TTAAGAGGTG TCGGACTAGC GATGATTACA GTGCCTTTAT CGGTACTGGC GGTATCTTCA
CTCGCTCCGG CAGATTTTGC ACAGGGGGCA GCGCTCAATA ATATGATGCG TCAGCTGGGT
GGTTCCTTCG GACTCGCCAT GGTGAATACT TATCTCGCCA ACCGTAATGC AGTACACCGC
TCAGACCTTG TATCCAATAT CACGCTCGAC AATCCTGCTG CTGTAAAACG CCTGGCCGAT
TACACGCAAT TCTTTATATC CAAAGGCACA GGGGCGGTGG AAGCACATAC AAAAGCCCTC
CGGCTGATGG ATGCCAATAT TGTCAAACAA ACATCTTTAC TCAGCTTCAA TGACGCTTAT
CTGCTGGTAG GCATTGTATT CCTTTGTGCG CTGCCCCTAC TCCTGCTGGC AACGCCCAAG
AAGAAAGGAC AGCAGGTAAA AGTAGTGCTG GCTGATCACT GA
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| Protein sequence | MKRIILLITV IAAAVMELID TSIVNVALSH MSGNLGATLE DTSWVITAYA IANVIIIPIT
SFLVNKLGRR NYYIGSIIAF TFFSFMCGQA SNIWLLVTFR FLQGIGGGAL LSVSQVIVFE
LFPKEKQNIA SALFGVGVFV GPTIGPTLGG YITEFYDWPW IFYINIPIGI VAASICYALL
KEPEIKVKAS SIDWAGIILL AIGIGSLQTV LERGETDDWF EAGYIIFLSV TAFFGLLLFV
WWELTTPTPV VNLRVLKSRN LSLAAVMTFV SGVGLFSSVF LTPVFAQRLL NFTPTQTGLL
LLPGAILAIG GLIISARLLQ RGISPIVMIT LGMSMFILFS WQMSGYNLDV SASGLTNTLI
LRGVGLAMIT VPLSVLAVSS LAPADFAQGA ALNNMMRQLG GSFGLAMVNT YLANRNAVHR
SDLVSNITLD NPAAVKRLAD YTQFFISKGT GAVEAHTKAL RLMDANIVKQ TSLLSFNDAY
LLVGIVFLCA LPLLLLATPK KKGQQVKVVL ADH
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