| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4963 |
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| Symbol | |
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| ID | 8361139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6209283 |
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| End bp | 6210851 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967112 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003124597 |
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| Protein GI | 256423944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0875398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.252786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATC AACCCGGCTT TCCTGAATTT GTGCAACAAC AGGCCGGCAA ACTACTGGAA
CAAACGTTGC AACATATCGG GCTAACATTT ATTTCTTTAC TGATCGCAGT CGTCATCGGT
GTACCGCTGG GCATACTGAT CACCCGTAAA AAAAAGCTGG CAGGCGCCAT ATTAGGCATT
GCCGGCGTTT TACAGACCAT ACCCAGTATC GCCTTACTCG GTTTCATGAT CCCCCTGCTG
GGCATCGGCG CCAAACCGGC GATTGTAGCA CTCTTTCTGT ATGCACTCCT GCCTATTATC
AGAAATACCT ATACGGGTAT CCTGCAGGTA GATCCTACCG TTATTGATGC CGCAACAGGT
ATGGGTATGA GTCAGCAGCA ACTGCTGTTA AAAGTACAAC TGCCACTGGC CATGCCGGTA
ATACTGGCAG GCATCCGAAC GGCAACGGTA ATCAATGTTG GCGTCGCTAC CCTGGCCGCC
TATATCGCAG CAGGTGGTTT AGGTGAATTC ATTTTTGGCG GTATCGCACT CAATAATACC
AACATGATAC TGGCAGGCGC TATTCCGGCT GCCTTATTGG CCATATTGTT TGATGCAGGT
GTGGCACGAC TGCAAAAACT ACGGATGCGA AGCGTCAAAA CGGCATTGTA TATCTTACCT
TTTTTGTTGC TTATCTTATC GTCTTTTTAC CTGCTTCCAG CCGCATATGG CAGTAGCCTC
GTAGCCGGAT TTACACCAGA ATTTATGGGG CGTAAAGATG GAAATCTGGG CTTAAAACAG
GTATACGGAC TGAATATGCG CACAGTCGTG ATCAGCGATA TGATCATGTA TAAAGCGGCT
TACGAGAAAA CCCTGGACGT CATCAGCGGC AGCAGTACAG ATGGCAGGGT CAAGGCTTTT
GACCTGCAGG TGCTGGAAGA TGATAAACAT ATCTTTCCCC CCTACTACGC AGCGCCCATC
GCACGGCAGG CCACACTCGA TAAGTATCCT GAACTCGCGC CCGCACTAAA TAAACTATCT
GGTATAATTA ATGATAGTGT AATGACTGAA CTGAACTACA GGGTAGATCA CCTGAAACAG
GATCCCGCAC TTGTAGCCAG TGATTTTTTA AAAGCTAAAG GATTATTACA GCCAGCCAGA
AAAGGTGCTA AAGGAACAGT TGTCATCGGT GCTAAAATAT TCGGGGACGG CTACATTCTT
GCCAATATGT ATAAACTGCT GGTGAACGGG TATACTGACC TGGAAGCAGT CACAAAAACC
GGCCTGGGAG GTACTAAAAT CTGTTTTGAT GCACTCACCA GTGGACAGAT AGATCTTTAC
CCCGAATATA CGGGTACCGG TTTACTGGTC ATTTTACAGA CAGATAAAGC TGTTATCGAC
TCCCTGATTG CGGACAAACA AAAAGTATAT GACTACGTTT CACAGGCGTT TATACAACAG
TACCAGATCA GATGGTTACC TCCTATTGGC TTCAACAACA CATATGCATT AATGATGCGC
AAACAGCAGG CAGCTGAGCT GCATATCACA TCTATATCAG ATCTAAAGGA ATATTTACAG
CATCACTAA
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| Protein sequence | MEDQPGFPEF VQQQAGKLLE QTLQHIGLTF ISLLIAVVIG VPLGILITRK KKLAGAILGI
AGVLQTIPSI ALLGFMIPLL GIGAKPAIVA LFLYALLPII RNTYTGILQV DPTVIDAATG
MGMSQQQLLL KVQLPLAMPV ILAGIRTATV INVGVATLAA YIAAGGLGEF IFGGIALNNT
NMILAGAIPA ALLAILFDAG VARLQKLRMR SVKTALYILP FLLLILSSFY LLPAAYGSSL
VAGFTPEFMG RKDGNLGLKQ VYGLNMRTVV ISDMIMYKAA YEKTLDVISG SSTDGRVKAF
DLQVLEDDKH IFPPYYAAPI ARQATLDKYP ELAPALNKLS GIINDSVMTE LNYRVDHLKQ
DPALVASDFL KAKGLLQPAR KGAKGTVVIG AKIFGDGYIL ANMYKLLVNG YTDLEAVTKT
GLGGTKICFD ALTSGQIDLY PEYTGTGLLV ILQTDKAVID SLIADKQKVY DYVSQAFIQQ
YQIRWLPPIG FNNTYALMMR KQQAAELHIT SISDLKEYLQ HH
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