Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4939 |
Symbol | |
ID | 8361115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6176362 |
End bp | 6177582 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967088 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003124573 |
Protein GI | 256423920 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.485903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.767822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC TTAACCTGAT AAGGATTGCT TTGAAAGCTT TGCAGCGGAA TAAACTGCGG GCCTTTCTGA CCATGCTCGG TATTATTATC GGTGTGGCAG CGGTGATTGC AATGGTGGCT ATCGGACAAG GCTCAAAGGA AAGTATACAG TCACAACTGT CCAGTATGGG GTCCAATATG ATCACCATAC TGCCGGCCAG TAATGTGACA GGGGGCGCCA GACTGGAAGG AGCGAGCGTA CAGACGTTAA CCATAGAAGA TGTAAAAGCG ATTCAGAAAC AGGCACTTAA TATCAGTGCG ATTTCACCGG CCGCCAATTC CAGCGGACAA TCCATCAACG GGGCCTTTAA CTGGCCGACC AGTATACAGG GCGTAGCGCC GGGATATCTG GATATCAGGA AATGGAGTCT CCAGGATGGC GTGCCATTTA CGGATGAAGA TGTGAGAGCG TCTGCAAAGG TTTGTCTGCT GGGGCAAACT GTTGTCAGTA ATCTGTTCCC TAATGGAGAT AACCCCGTAG GGAAGATCAT CCGCTTCAAT AATATTCCAT TCCAGGTGAT CGGAATACTG GCCGCCAAAG GACAGAGTTC TTTCGGGCAG GACCAGGATG ATGTGATATT AGCACCGTAT ACGACGGTGC AGAAACGTAT CCTGGCTACC ATCTATTTCA GGACGCTTTA TGTCTCTGCG GTCAGCGAGG CGGCGACAGA TGCCGCCACA AAGGAAATTG AGACTATCCT GCGGAAATCC CACCGTCTGA GAGATGCGGA TGAAAATGAC TTCCAGGTGA GGACTATGGC TGAGTTAATC AATACGTTGA GTTCTACCAG TAACCTGCTG ACGATTCTGT TAACTGCCAT TGCGGGTATA TCCCTGGTTA TTGGAGGGAT CGGTATCATG AATATCATGT ATGTGTCCGT AACAGAGCGT ACGCGGGAAA TCGGCCTGCG TATGTCTATC GGTGCAAGAG GGATAGATAT ACTGATGCAG TTCCTGATAG AGGCCATCAT GATCAGTATC ACCGGTGGTC TGATAGGTGT TGTGTTAGGC ATCACTTCTG CCTGGCTGAT CACGTTTTTT TTACATTGGC CGACGCTGGT ATCTGAATCG TCGATTATAC TGTCTTTTAT GGTGTGTGCA TTGACAGGCG TCTTCTTCGG CTATTATCCT GCGCAAAAAG CCTCCCGGCT GGATCCGATA GAGGCTTTGC GATATGAATA A
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Protein sequence | MNILNLIRIA LKALQRNKLR AFLTMLGIII GVAAVIAMVA IGQGSKESIQ SQLSSMGSNM ITILPASNVT GGARLEGASV QTLTIEDVKA IQKQALNISA ISPAANSSGQ SINGAFNWPT SIQGVAPGYL DIRKWSLQDG VPFTDEDVRA SAKVCLLGQT VVSNLFPNGD NPVGKIIRFN NIPFQVIGIL AAKGQSSFGQ DQDDVILAPY TTVQKRILAT IYFRTLYVSA VSEAATDAAT KEIETILRKS HRLRDADEND FQVRTMAELI NTLSSTSNLL TILLTAIAGI SLVIGGIGIM NIMYVSVTER TREIGLRMSI GARGIDILMQ FLIEAIMISI TGGLIGVVLG ITSAWLITFF LHWPTLVSES SIILSFMVCA LTGVFFGYYP AQKASRLDPI EALRYE
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