| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4936 |
|---|
| Symbol | |
|---|
| ID | 8361112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6174151 |
|---|
| End bp | 6175044 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644967085 |
|---|
| Product | protein of unknown function DUF62 |
|---|
| Protein accession | YP_003124570 |
|---|
| Protein GI | 256423917 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1912] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.455313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA CATTTATTTT CCATTGTTTG ATGATTATAT GCTGCTCCTG CTTTGCACAA
AAGCGCGCAT TGGTCTTCCA GACGGACTTC GGACTGAAGG ACGGGGCTGT AGCCGAAATG
AAAGGAGTGG TGTATAGTTT GTCACCCGAT ATTCCAATGT TCGATCTCAC ACATGAAATA
CCTGCCTATA ATATCTGGGA GGCTGCCTAT CGTTTGCAAC AGACCGCTCC CTACTGGCCT
TCAGGAACGG TATTCGTATC GGTAGTGGAT CCGGGAGTGG GCTCAGACAG ACGCTCTGTT
GTGTTGAAGA CGAAAACCGG GCACTTCTTT GTCACCCCTG ACAATGGTAC GCTGACCCTG
GTGGCGAAAC AGCTGGGAAT CGCGGAGATC CGGCAGATTG ACGAGGCGGT AAACCGAAGG
AAAAACTCGG GCGCTTCTTA TACTTTTCAT GGCAGGGATG TCTATGCTTT TACAGCAGGC
AAACTGGCCG CCGGGAAGAT TACTTTTGAG CAGGTAGGAC CTAAACTGGC AGACTCAGTC
GTGAGGATCC CTTTCCAGCA GCCGGTGTAT GCTGATGGTA CAGTAAAGGG AAATATCCCT
GTGCTGGATG TACAGTATGG AAATATATGG ACAAATATAG ACCAGCAGAC TTTCGCAAAA
ATGCAGGTAA AACCGGGTGA GCAGCTGAAG ATTATGATCT ATAAAGGAAA TGAACAGGTT
TATAGCGGTA TAATGCCCCT GGCCAATACC TTCGCCGCTG TACCTGAGGG CAAAGAACTT
TTATACCTCA ATAGTCTGCT AAATGTGTCA TTTGCAGTGA ATATGGGCGA TTTCGCGACC
CGTCACCAGG TAAAGAGTGG TCCGGAGTGG ACAGTGACGA TTAGTCGTCC ATAG
|
|---|
| Protein sequence | MKHTFIFHCL MIICCSCFAQ KRALVFQTDF GLKDGAVAEM KGVVYSLSPD IPMFDLTHEI
PAYNIWEAAY RLQQTAPYWP SGTVFVSVVD PGVGSDRRSV VLKTKTGHFF VTPDNGTLTL
VAKQLGIAEI RQIDEAVNRR KNSGASYTFH GRDVYAFTAG KLAAGKITFE QVGPKLADSV
VRIPFQQPVY ADGTVKGNIP VLDVQYGNIW TNIDQQTFAK MQVKPGEQLK IMIYKGNEQV
YSGIMPLANT FAAVPEGKEL LYLNSLLNVS FAVNMGDFAT RHQVKSGPEW TVTISRP
|
|---|
| |