| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4926 |
|---|
| Symbol | |
|---|
| ID | 8361102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6162001 |
|---|
| End bp | 6163053 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644967075 |
|---|
| Product | rhamnose-proton symporter |
|---|
| Protein accession | YP_003124560 |
|---|
| Protein GI | 256423907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000555456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.792801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTA TTTTAGGTGT ATTCTTTCAT TTTATCGGAG GTTTTGCCTC GGGCAGTTTT
TATATCCCTT TCAAAAAAGT GAAAAACTGG TCCTGGGAAA GTTACTGGAT CGTTGGAGGT
TTCTTTTCCT GGTTGATCGT GCCTTTCCTG GCTGCCTGGA TCACTGTGCC GGACTTTCTG
AGCATCATCG GTGCGACAGA TGGAACAACG CTCTTCTGGA CGTATTTTAT GGGTGTATTG
TGGGGTATTG GTGGTCTGAC TTTTGGGCTG GCGATGCGTT ATCTCGGCAT GTCGCTGGGG
ATGTCAGTTG CATTAGGATA TACTTCGGCA TTCGGGTCAC TGATTCCACC GGTATACCGG
GATATTTTCA CAAATGATAC AGAACATACT TTTTCCAATA TGATCCAGAG TCCAGGCGGA
CTACTGGTTT TATCCGGCGT AGCCGTATGT CTGATTGGTA TTGCGATTTG TGGCGCTGCA
GGTGTGATGA AAGAACGGGA GCTGTCTGAC GAAGCAAAAA AGCAAAGCAT CAAGGAGTTT
AATCTGCGTA AAGGGCTGAT CGTGGCCACT GTTTCGGGTG TGCTGAGCGC CTGTTTCAAT
TTTGGGATAG AAGCAGGTAA GCCAATGGCG GCTATTGCTA TAGAGCAGGG TAGTAATCCG
CTGTTTCAGA ACAACGTCAT TTTTGTGGTA TTGCTGTGGG GGGGATTGAC GACTAATCTG
TTCTGGTGTA TGATCCTCAA TGTACGAAAC AGGACTTTCG GCGATTATGT AAATAAAGAC
ACTCCGCTGG CGGGCAACTA CTTCTTTGCC GCCCTGGCAG GTACCACCTG GTTTTTCCAG
TTCTTCTTCT ATGGTATGGG TGAAAGTAAA CTGGGGAATG GCGCCAGTTC CTGGATCTTA
CATATGGCGT TCATTATCAT GATATCCAGC CTCTGGGGCA TAACCCTGAA GGAGTGGAAA
GGCGTAAGCC GTAAAACATT TGGGACAATA CTGCTAGGTG TATTGACCAT CTTTTTGTCT
GTGATGCTGG TCGGATATGG TAACTCTATC TGA
|
|---|
| Protein sequence | MQAILGVFFH FIGGFASGSF YIPFKKVKNW SWESYWIVGG FFSWLIVPFL AAWITVPDFL
SIIGATDGTT LFWTYFMGVL WGIGGLTFGL AMRYLGMSLG MSVALGYTSA FGSLIPPVYR
DIFTNDTEHT FSNMIQSPGG LLVLSGVAVC LIGIAICGAA GVMKERELSD EAKKQSIKEF
NLRKGLIVAT VSGVLSACFN FGIEAGKPMA AIAIEQGSNP LFQNNVIFVV LLWGGLTTNL
FWCMILNVRN RTFGDYVNKD TPLAGNYFFA ALAGTTWFFQ FFFYGMGESK LGNGASSWIL
HMAFIIMISS LWGITLKEWK GVSRKTFGTI LLGVLTIFLS VMLVGYGNSI
|
|---|
| |