Gene Cpin_4906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4906 
Symbol 
ID8361082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6131958 
End bp6132854 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content48% 
IMG OID644967056 
ProductHPr kinase 
Protein accessionYP_003124541 
Protein GI256423888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0668062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.137945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAT ATTGGGGCTT TGGCCTGTTG ATATCATCCG GAATTGAATT CCCTGAACTG 
ATGCCTGCAT CGTCTCCGCA TACAGATGTA ACCATTACAA TCGATGTAAT TCCACAGATT
CATGCGACGA CAACTTTCAG TACAGGACGT ATTACGTATT ATATGAATGA CCGTGAGCTG
GTCTTTACGG TGGGAGATAT TGCTTCCTAT TATGTGGCTG ACGGTACCAG GATTATCATC
TCGCCGTTAA CAACGGAAGC GGAAGACCGG TTTCTGCGGA TGTTTGTATT GGCTGGCGCC
ATGGCCGGTA TATTACAGCA ACGGAAGCAG CTGCCGCTTC ATGCAGCGGG TATTGTGAGC
GCAGGTGGAC TGACGCTGAT CAGCGGACAT TCCGGAGCGG GTAAATCTAC TACGCTTGCG
GGGCTACAGG AAAGGGGATA CCGCATTTTT ACGGATGATG TCACTGTTTT AAGACAGTTA
CCTGATGATG ATTGTGTACG GGGAATCGCT TCTTATCCCA TGTTGAAGCT TTGGGAACAA
TCCCTGCAAA CCCTGCAATG GAATGACCGC TCTTTTCCGG TGATGCCAGG TATGGAGAAA
TACGGTATAT TCTTTCACCA GCATTTTGAT ACGCAGCACT ATCCTGTTAA AAAAATAATA
CTGCTTTCCG CAGGGGAGGT CAGTGAAATT CAGCAGGAAA AGCTGACCGG GAGTAAAGCA
TTTACCCATA TTGTGCAACA TATCTATAAA GAGGTACTGT TCCGGCAACC CGCTACCCGG
GCTTTGTGTT TTGATACAAT CAGCGCCGTG ATCAGACAGG CGGAGACCCA TCTGATCAGA
CGGCCTGCGG ATTGTGATCC TGCGCATTTG TTGAATACGG TAACTGCCTT GTTATGA
 
Protein sequence
MHKYWGFGLL ISSGIEFPEL MPASSPHTDV TITIDVIPQI HATTTFSTGR ITYYMNDREL 
VFTVGDIASY YVADGTRIII SPLTTEAEDR FLRMFVLAGA MAGILQQRKQ LPLHAAGIVS
AGGLTLISGH SGAGKSTTLA GLQERGYRIF TDDVTVLRQL PDDDCVRGIA SYPMLKLWEQ
SLQTLQWNDR SFPVMPGMEK YGIFFHQHFD TQHYPVKKII LLSAGEVSEI QQEKLTGSKA
FTHIVQHIYK EVLFRQPATR ALCFDTISAV IRQAETHLIR RPADCDPAHL LNTVTALL