Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4892 |
Symbol | |
ID | 8361068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6120707 |
End bp | 6121834 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967042 |
Product | hypothetical protein |
Protein accession | YP_003124527 |
Protein GI | 256423874 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0635227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.333263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACAAGA CATCCGCCTT TTTATTATTA CTGCTTTCCT CCCTTATTGC CGCCGCACAA CCCAGGGTGA GCAGACAACA GGCCAAATCA TTATCCGCAC CACACAGAAA CAGTATTGCA TTAACGCCCG ACAACTGGGA GGTTAAACCC AATTCCGTTG AATTCCTGAC CTGGCAATCT GTCCCTGCTA TGAAAATAAC GACCAGCGAC GGCTCAGCCG TACTCAAAGG GGTAGATTTC ACTGACGGGA CCATCGAGTA TGATATGGAC CCTGTTGACC CACGTTTTAC TTCTATGTAC TTCAGACAAA GTTCCACCGA CGAACGGGAA TGCTTCTACT TCCGTACCAA AGCTGCCGGT AACAATACCG CTATGGATGC TATTCAATAT GCTCCCTTTA TCGCAGGTGT CAATCTCTGG GATATGCTGC CCGCTTATCA GGGGAATGCG ACCTATGAAA GAGGGAAGTG GAACCACGTC AAACTGGTGA TCTCCGGAAA ACAGATGTGG GTCTATATCA ATGACACCGC CCGGGCGGCA CTTAAGATTC CCCGCCTGGA AGCAAATGTA CAACATGGCA GCATCGGTTT TGAAGGACAG GTCATCATTG CCAATCTGGT GATCAGACCT GGTGATACAG GTGGTCTTTC TCCTGCAGCA TCTCCCGATC TTACCGATAG TGATCCACGT TATCTCCGCG AATGGAAAGT AACGAGCCCT TTAGTGACGA CTAAAGATAT AGACTTCAGC AGCAGCTTTA TGCCGGCAAA AGAAGCTGCC TGGGAGGATA TCTGGACAGA AAGAGGCGGA CTGGTAAACC TGACCCGCAA ATTTGGGATG AGTAAGGAAC GTCGTATCGT ATGGCTGAAG ACAAAGATCC ACGCGGATAA ACAACAACTG AAAAAGCTTA ACCTGGGCTT CAGCGATGAA GTATGGGTAT TTATCAATGG CAGATACCTG TACGTGGACA AGAACCTCTA CGGTATGCCG ATCATGAAAA CGCCGGAAGG AAGATGTTCT ATTGAAAATA CGGCCTTTAA CGTTCCGCTG AACGAAGGTG ACAACGAACT GCTCATCGGC GTAGCCAATA GCTTCTACGG CTGGGGGATT ATTGCGCGAC TCGACTAA
|
Protein sequence | MYKTSAFLLL LLSSLIAAAQ PRVSRQQAKS LSAPHRNSIA LTPDNWEVKP NSVEFLTWQS VPAMKITTSD GSAVLKGVDF TDGTIEYDMD PVDPRFTSMY FRQSSTDERE CFYFRTKAAG NNTAMDAIQY APFIAGVNLW DMLPAYQGNA TYERGKWNHV KLVISGKQMW VYINDTARAA LKIPRLEANV QHGSIGFEGQ VIIANLVIRP GDTGGLSPAA SPDLTDSDPR YLREWKVTSP LVTTKDIDFS SSFMPAKEAA WEDIWTERGG LVNLTRKFGM SKERRIVWLK TKIHADKQQL KKLNLGFSDE VWVFINGRYL YVDKNLYGMP IMKTPEGRCS IENTAFNVPL NEGDNELLIG VANSFYGWGI IARLD
|
| |