Gene Cpin_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4892 
Symbol 
ID8361068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6120707 
End bp6121834 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content48% 
IMG OID644967042 
Producthypothetical protein 
Protein accessionYP_003124527 
Protein GI256423874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0635227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.333263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGA CATCCGCCTT TTTATTATTA CTGCTTTCCT CCCTTATTGC CGCCGCACAA 
CCCAGGGTGA GCAGACAACA GGCCAAATCA TTATCCGCAC CACACAGAAA CAGTATTGCA
TTAACGCCCG ACAACTGGGA GGTTAAACCC AATTCCGTTG AATTCCTGAC CTGGCAATCT
GTCCCTGCTA TGAAAATAAC GACCAGCGAC GGCTCAGCCG TACTCAAAGG GGTAGATTTC
ACTGACGGGA CCATCGAGTA TGATATGGAC CCTGTTGACC CACGTTTTAC TTCTATGTAC
TTCAGACAAA GTTCCACCGA CGAACGGGAA TGCTTCTACT TCCGTACCAA AGCTGCCGGT
AACAATACCG CTATGGATGC TATTCAATAT GCTCCCTTTA TCGCAGGTGT CAATCTCTGG
GATATGCTGC CCGCTTATCA GGGGAATGCG ACCTATGAAA GAGGGAAGTG GAACCACGTC
AAACTGGTGA TCTCCGGAAA ACAGATGTGG GTCTATATCA ATGACACCGC CCGGGCGGCA
CTTAAGATTC CCCGCCTGGA AGCAAATGTA CAACATGGCA GCATCGGTTT TGAAGGACAG
GTCATCATTG CCAATCTGGT GATCAGACCT GGTGATACAG GTGGTCTTTC TCCTGCAGCA
TCTCCCGATC TTACCGATAG TGATCCACGT TATCTCCGCG AATGGAAAGT AACGAGCCCT
TTAGTGACGA CTAAAGATAT AGACTTCAGC AGCAGCTTTA TGCCGGCAAA AGAAGCTGCC
TGGGAGGATA TCTGGACAGA AAGAGGCGGA CTGGTAAACC TGACCCGCAA ATTTGGGATG
AGTAAGGAAC GTCGTATCGT ATGGCTGAAG ACAAAGATCC ACGCGGATAA ACAACAACTG
AAAAAGCTTA ACCTGGGCTT CAGCGATGAA GTATGGGTAT TTATCAATGG CAGATACCTG
TACGTGGACA AGAACCTCTA CGGTATGCCG ATCATGAAAA CGCCGGAAGG AAGATGTTCT
ATTGAAAATA CGGCCTTTAA CGTTCCGCTG AACGAAGGTG ACAACGAACT GCTCATCGGC
GTAGCCAATA GCTTCTACGG CTGGGGGATT ATTGCGCGAC TCGACTAA
 
Protein sequence
MYKTSAFLLL LLSSLIAAAQ PRVSRQQAKS LSAPHRNSIA LTPDNWEVKP NSVEFLTWQS 
VPAMKITTSD GSAVLKGVDF TDGTIEYDMD PVDPRFTSMY FRQSSTDERE CFYFRTKAAG
NNTAMDAIQY APFIAGVNLW DMLPAYQGNA TYERGKWNHV KLVISGKQMW VYINDTARAA
LKIPRLEANV QHGSIGFEGQ VIIANLVIRP GDTGGLSPAA SPDLTDSDPR YLREWKVTSP
LVTTKDIDFS SSFMPAKEAA WEDIWTERGG LVNLTRKFGM SKERRIVWLK TKIHADKQQL
KKLNLGFSDE VWVFINGRYL YVDKNLYGMP IMKTPEGRCS IENTAFNVPL NEGDNELLIG
VANSFYGWGI IARLD