| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4837 |
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| Symbol | |
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| ID | 8361013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6041623 |
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| End bp | 6044544 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966987 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_003124472 |
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| Protein GI | 256423819 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.286258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000327471 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC TACTCTCTCC GGATCCAGCG AAGATTGAAC CATTACCACA TGAGCCAACG
CATGACAGGG CGCCGGATAG CGTCGCTGAA GGAACGCCGC AATGGCTTAA AAAAGATATG
ATCGGTTTAC TGGGAGAAGA GCAGGTTCTC TATAAAGCAC TCGACCTCAT ACGCTATGCA
ACTGACGCAA GTCCGTACCG TATGATCCCG AAAGTAGTGG TAACGCCCAC CTCCGAAGAA
CAGGTGCTGG CGATATTTAA ATATTCACGG GAAAAACAGA TCCCCGTTAC CATACGTGCT
TCCGGCTCCA GTTTAAGTGG ACAGGCCCAG GGCGACGGTA TCCTGCTGGA TGCCCGTAAA
CATTGGGCGG GTGCTACTGT CGAAGCAGCC GGGAAACAAT TACGGGTAAG ACCCGGCACG
ATTATGTTCC GCGCCAACCT GGCACTGCGT CCTTATGGCT ATCGCCTCGG ACCAGACCCT
GCCAGTGGCA GCGTAGCCTC CATCGGTGGC GTTGTAGCTA ACAATTCCAG CGGGATGTGT
TGCGGCACTG CCCAAAACTC CTACAAGACC ATTTCCTCCC TGTCATTTAT GCTGCCATCC
GGCACCCGCA TCAATACCGC GGATCCGGAC GCAGAAGCAC AATTCCAGCG TGCAGAACCG
GCATTATGTG AAGGACTGAA AGAAATAAAA GCGGAAATTG AAGCCGATGC AGCGCTCAGC
GCCCGCATTG TCAAAAAATT CAGCATCAAG AACACCACCG GTTATCATAT GGGGGCTTTC
CTGGATGGGA AAACACCGTT AGAGATCTTC CGTCGCCTCA TGGTAGGTTC AGAAGGTACT
TTAGGATTCA TCTCAGAAGT GGTATTCGAC ACCGTACCGG ACGATCTGCA CAGACTGACT
GCTTTCCTCA TTTTCCCCGA TATGTACTCC GCCTGCGCAG CAGTAGCGCC TTTTATAAAG
GCAGGCGCCA TGGCAGTAGA ACTATCGGAC AGGGCATCAC TACACGCAGT GGAAGGCAAA
CCTGGCGTAC CCGATCGCTG GGAAGCATTC GACGAAAATG CGACCGGCTT GCTGGTGGAA
TTCCGGGTAG CAACGAAAGA ACTATTAGCA GTAGCTGAAC AAGCCGCAAA CGATATACTA
TTGACCTTAC CATTACTGGA ACCAGGTTCT TTCACAAAAG ACCCGAAACT GGCAGCCCAG
TTCTGGACCG TCCGGAATGG CTTATTACCT TCCGTTGGAG GTACACGCCC AAGCGGCACT
TCCCTGATCC TGGAAGACGT CTGCTTTCCA CCCGAAAGAC TCGCAGAAGG CGCCGTTGAT
CTGCAATTAC TGATTGCGAG GCATGGTTAT AAAGGCTATG TCTTCGGACA TGCATCCGCT
GGTAACCTGC ATTTCCTGGT CACTCCTTCT TTTAACTCTG CCGAAGAATT ACAGCGTTTT
GATGCCTTTC TGAGAGATGT CATCGAACTC GTAGTTGGAA AATATGACGG TTCCCTGAAA
GCAGAACACG GTACAGGCCG AAACATCGCT CCTTTCGTAG AACATGAATG GGGACCAAAA
CTGACGGGGC TGATGTGGAA ACTAAAACGA CTGGCCGATC CTGACGGGAT ACTCGGGCCG
GGCGTTTTGC TCTCCGCAGA TCCGGCATCT CACCTGCAGC ACCTGCATAC CATTCCTACA
GTTGAAAATG AAGTAGATCG TTGTATTGAA TGTGGGTACT GCGAACCCGT ATGTCCAAGC
CGTAACCTCA GCACCACCCC AAGACAACGT ATTGCGCTGC GCAGGGAAAT GCTGCGTCAG
CCGCAAGGCT CACCGGTAAC AGCGGCCCTG TTACAGGAAT ACGAATACAG TGCGATTGAA
ACCTGTGCCG GCGATGGCAG CTGCGAAATT GCTTGTCCGC TGGATATCAA TACCGGCGTA
CTGATGAAAG AGTTCCGCTC TATGGAACAC ACGCGTAAAG CTGAACAGAT TGCCCTCAAA
CTGGCAAAAA ACTGGGGAAC AGTGGAAAAA GTAATGCGCG GCGCACTCTC ACTGAACGCC
GCTACGCAAA CGATCCTCTC CGGCCTGCCG GCCAAAGGAC TGACCGCCCT CGCCAGAACG
GTTGTCAGTG AAGACCTGAT GCCGGCCTGG ATCCCTAACA TCCCGCATCC CGCAAAAACA
AAACTGCCTG CTACCAGCAA AGAAGGAGCA GCTGCGGTTT ATTTTACCGC CTGTGTGAAC
CGTATATTCG GCGCATCCCG GGGGGAAAAG CAGGAAATGA CACTGGCAGA AGCCATGGTG
ACACTCTCTG ATCGTGCCGG ATTACCCGTA TGGATACCGG AAGACCTGGG AGGGAACTGC
TGCGCTACCG TATGGCATTC TAAAGGATAT GTCGAGGGCA ATACCTACAT GGCCAATCAG
GTAGTAGAAA GCATGTGGCG CTGGAGCGAC GGAGGACGGC TCCCGGTTGT CTGTGACGCC
AGCTCGTGTA CCTTCGGTAT TACCAGCGAG ATCCTGCATT ACCTGACGCC GGAGAACCTG
GATAAACACC AGAAAATGAC ACTCCTGGAC TCTATCGCCT GGGCGCATGA CCACCTGTTG
CCAAGACTTG AAATAAAGCA GAAAACAGGC GCCACAGTGA TACATGCGGT CTGCTCGACA
CAACACCTCA ACCTTGCAGG GAAACTGCTC ACAATCGCCC AGAAAGTGTC AGAAACGGCA
TATAATCCGA TACATTCCAC CTGTTGTGCC TTCGCCGGAG ACAGAGGCTT CCTACATCCC
GAGTTAACAC ACGACGCCAC ACAGGAAGTA GTAGCGGAAA TAAAAGACAA ACACTTCGAT
CAGTATATTT CCAGTAACCG GACCTGTGAG ATCGGTATGA ACCTGGCAAC GGGCCAGGAT
TACAAATCTG TAATATTCCT GCTGGAAGAA GCGACCAGGT AA
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| Protein sequence | MKKLLSPDPA KIEPLPHEPT HDRAPDSVAE GTPQWLKKDM IGLLGEEQVL YKALDLIRYA
TDASPYRMIP KVVVTPTSEE QVLAIFKYSR EKQIPVTIRA SGSSLSGQAQ GDGILLDARK
HWAGATVEAA GKQLRVRPGT IMFRANLALR PYGYRLGPDP ASGSVASIGG VVANNSSGMC
CGTAQNSYKT ISSLSFMLPS GTRINTADPD AEAQFQRAEP ALCEGLKEIK AEIEADAALS
ARIVKKFSIK NTTGYHMGAF LDGKTPLEIF RRLMVGSEGT LGFISEVVFD TVPDDLHRLT
AFLIFPDMYS ACAAVAPFIK AGAMAVELSD RASLHAVEGK PGVPDRWEAF DENATGLLVE
FRVATKELLA VAEQAANDIL LTLPLLEPGS FTKDPKLAAQ FWTVRNGLLP SVGGTRPSGT
SLILEDVCFP PERLAEGAVD LQLLIARHGY KGYVFGHASA GNLHFLVTPS FNSAEELQRF
DAFLRDVIEL VVGKYDGSLK AEHGTGRNIA PFVEHEWGPK LTGLMWKLKR LADPDGILGP
GVLLSADPAS HLQHLHTIPT VENEVDRCIE CGYCEPVCPS RNLSTTPRQR IALRREMLRQ
PQGSPVTAAL LQEYEYSAIE TCAGDGSCEI ACPLDINTGV LMKEFRSMEH TRKAEQIALK
LAKNWGTVEK VMRGALSLNA ATQTILSGLP AKGLTALART VVSEDLMPAW IPNIPHPAKT
KLPATSKEGA AAVYFTACVN RIFGASRGEK QEMTLAEAMV TLSDRAGLPV WIPEDLGGNC
CATVWHSKGY VEGNTYMANQ VVESMWRWSD GGRLPVVCDA SSCTFGITSE ILHYLTPENL
DKHQKMTLLD SIAWAHDHLL PRLEIKQKTG ATVIHAVCST QHLNLAGKLL TIAQKVSETA
YNPIHSTCCA FAGDRGFLHP ELTHDATQEV VAEIKDKHFD QYISSNRTCE IGMNLATGQD
YKSVIFLLEE ATR
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