Gene Cpin_4769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4769 
Symbol 
ID8360945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5946214 
End bp5946777 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID644966920 
Producthypothetical protein 
Protein accessionYP_003124405 
Protein GI256423752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0908146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.309715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA ATAGAAATAA CATACTCCTG ATGGGGTTGA GCGGCTCTAT CGGCGATCAG 
CTGACCATCC GCCAGGTAAA CGGCAAAACG GTTGTAGGCC GGAAAAGAGG GAGGAGCACC
ACACCGCCTA CCCGTAAACA AACAGCCGTG TTAGAGCGAT TCAGAATTGC AACAAAATTG
GCGACGGCTG CATGGAAGGA TCCGGAGAAG AAAGCTGTCT ACCAGGAGAT CGCAAAGAAA
CGTAAAAAGA ACGCCTATAC CTTATTGTGT AAAGACGCGC ATTCATTCCC CGAAATCCGG
GACATTTTTA CTGACCATTA TAAAGGAGAA GCGGGGAACG TTATTTACAT ACAGGCAAGA
GATGTTGTGC AACTCGATTC AGTGGAAGTA ATGATCATCG CAGCAGATAG TACCGTGCTG
GAAACAGGAA GGGCAGTCGC CGGTAGTACA GAATGGGCAT ATACCTGTAA AGCGGCTAAC
AGTAGTCTTC CAGGTACCAG GATCGTCATT GCTGCGAATG ATATTCCTGG TAATCAGACA
ACCTGTGATT TCTTACTTAT ATAA
 
Protein sequence
MAINRNNILL MGLSGSIGDQ LTIRQVNGKT VVGRKRGRST TPPTRKQTAV LERFRIATKL 
ATAAWKDPEK KAVYQEIAKK RKKNAYTLLC KDAHSFPEIR DIFTDHYKGE AGNVIYIQAR
DVVQLDSVEV MIIAADSTVL ETGRAVAGST EWAYTCKAAN SSLPGTRIVI AANDIPGNQT
TCDFLLI