Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4769 |
Symbol | |
ID | 8360945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5946214 |
End bp | 5946777 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966920 |
Product | hypothetical protein |
Protein accession | YP_003124405 |
Protein GI | 256423752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0908146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.309715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCA ATAGAAATAA CATACTCCTG ATGGGGTTGA GCGGCTCTAT CGGCGATCAG CTGACCATCC GCCAGGTAAA CGGCAAAACG GTTGTAGGCC GGAAAAGAGG GAGGAGCACC ACACCGCCTA CCCGTAAACA AACAGCCGTG TTAGAGCGAT TCAGAATTGC AACAAAATTG GCGACGGCTG CATGGAAGGA TCCGGAGAAG AAAGCTGTCT ACCAGGAGAT CGCAAAGAAA CGTAAAAAGA ACGCCTATAC CTTATTGTGT AAAGACGCGC ATTCATTCCC CGAAATCCGG GACATTTTTA CTGACCATTA TAAAGGAGAA GCGGGGAACG TTATTTACAT ACAGGCAAGA GATGTTGTGC AACTCGATTC AGTGGAAGTA ATGATCATCG CAGCAGATAG TACCGTGCTG GAAACAGGAA GGGCAGTCGC CGGTAGTACA GAATGGGCAT ATACCTGTAA AGCGGCTAAC AGTAGTCTTC CAGGTACCAG GATCGTCATT GCTGCGAATG ATATTCCTGG TAATCAGACA ACCTGTGATT TCTTACTTAT ATAA
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Protein sequence | MAINRNNILL MGLSGSIGDQ LTIRQVNGKT VVGRKRGRST TPPTRKQTAV LERFRIATKL ATAAWKDPEK KAVYQEIAKK RKKNAYTLLC KDAHSFPEIR DIFTDHYKGE AGNVIYIQAR DVVQLDSVEV MIIAADSTVL ETGRAVAGST EWAYTCKAAN SSLPGTRIVI AANDIPGNQT TCDFLLI
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