| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4725 |
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| Symbol | |
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| ID | 8360901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5897339 |
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| End bp | 5900269 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966878 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_003124363 |
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| Protein GI | 256423710 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.881602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000909988 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAGATA AGCTCAGGGG TTTGGCCCGT GACCTGACGG GTACTCTATA CGATGATGAT
ACAATGCGTA CGCTGTACGC GACCGATGCA TCTGCTTACA GGGAAATGCC ACTGGCAGTA
GCCATCCCGG CACATGAACA GGACATCAAG ACATTGATCG CCTTTGCGCG CGCCAATAAA
ACCTCACTCA TCCCACGTAC CGCCGGTACC TCTCTCGCCG GACAGGTAGT AGGTAACGGG
ATTATAGTAG ATGTTTCGAG AACTTTCACG AAAATACTGG AAATCAATAC GGAAGAACAC
TGGGTAAGGG TACAGCCAGG TGTAATCAGG GATGAATTGA ATATGTTCCT GAAACCCTAT
GGCTTTTACT TCGGACCAGA AACTTCTACT GCCAACCGTG CCATGATCGG TGGGATGGTC
GGTAATAATT CCTGCGGATC CAACTCCGTT GTGTACGGTA GTACCCGCGA ACACCTGCTG
GAAGTTAAAG CGATCCTTAG CGACGGCTCG GACGTTGTTT TCAATAGCAT TTCTGCTGAC
GAGTTCCATG CCCGTTGTGA GAGAAATGAT AATAGTCTGG AGACCACCGT TTACCGCCAG
GTACGTACCC TGCTGGGGAA CCATAGTAAC CAGGAAGAGA TCCGCCGGGA GTTTCCAAAA
CCCAGCATCA CCCGTCGCAA CACCGGTTAC GCTGTTGATT TGCTGCTGGA AACAGCTCCT
TTCACTGCCG GTAAAGAAGA CTTCAACTTC TGTAAACTGA TCGCCGGATC TGAAGGTACC
CTCGCTTTCC TGACAGAGAT CAAACTGAAC GTTTCTCCAC TGCCACCCAA AGAAACCGGG
CTGGTTTGTA TCCACTTCAA TACTGTGGAT GAATCGCTGC GTGCCAATAT TATCGCAATG
AAATATAAGC CGAGCGCCAG CGAACTTATT GACCATTTCA TCCTGGAATG TACCAAGGAT
AATATTGAAC AAAGCAAAAA CCGCTTCTTT GTACAGGGAG ATCCGGGTGC GATCCTCGTG
GTGGAATTCT GCCGTGATAC CCGTGACGGG ATTACCGAGA TAGCCAATCA GCTGATTGCC
GAATTGCAGG CTGCCGGACT GGGTTACCAT TTCCCGCTGC TGTTTGGAGA CGACACTAAA
AAGATCTGGA CACTGCGTAA AGCAGGTCTT GGGTTGCTCA GTAACCTCCC TGGTGATGAA
AAAGCAGTCC CTGTTATCGA GGATACTGCG ATCGATATTG ACGATCTTCC GGCTTATATC
CGCGATTTCA ACGATATCCT GAAACAATAT GATCTTCACG CTGTACACTA TGCACATGCC
GGTAGCGGTG AAATCCACCT CCGTCCTATC ATCAACCTGA AAACGGAAGA AGGTAATCTG
CTCTTCAGAA AGATCGCCGA AGAGATCGCA ACACTCGTAA AGAAATATAA TGGTTCCCTC
AGTGGTGAAC ATGGTGACGG CCGTCTGCGT GGAGAGTTCA TCCGCCAGAT GATCGGCGAT
AAGAACTACA CCCTGCTGCG TGACCTTAAA TATACCTGGG ATCCGGAGAA TATCTTCAAC
CCGAATAAGA TCGTTGATAC GCCAAGCATG AACAGTATGC TGCGTTATAC CCCCGGACAA
AAAGCGCCGG AGCTGAAAAC GATCTTCCAT TTCCCCGAGC AGACCATTCT CCAGCATGCA
GAGCAGTGTA ATGGCTCGGG CGACTGTCGT AAAACAGAAA AAAGCGGTGG TACCATGTGT
CCGAGTTACA TGGCGACCCG CAATGAAAAA GATACCACCC GCGCAAGAGC GAATATCCTG
CGTGAGTTCC TGACCAATTC TACGAAAGAG AACCGTTTCG ATCATAAAGA GATCTATGAA
GTACTGGACC TCTGTCTGGC TTGTAAAGGC TGTAAGTCAG AATGTCCATC CAACGTAGAT
ATGGCCAAAC TGAAAATGGA ATTCCTGCAA CATTATCATG ATGCCAACGG CGTTCCTTTC
AGGGCAAAAC TGATCAGTAA TTTCACCCGT CTGAATGGTC TGGCTACAAT CGCACCGGGC
ATTTACAACT GGATGGTAAA TACACCACTG ACCAGTAACC TGATCAAAAA GACTTCCGGT
TTTGCGATCA AACGTTCTCT GCCTGAACTG CAATCCACCA CGCTGAGAAG CTGGTTCAAA
AAGCAGTGGC CGAAGGAGAA AAGTACAGTA CCTGCTACGA AGAAACAGGT ATATCTGTTC
TGCGATGAGT TCACCAACTT TAACGATACG CATATCGGTA TCAAAGCTGT TAAACTGCTG
CACCGTCTTG GCTATGATGT GAAGATGATC GAGCATCCTG AAAGTGCACG TGCCTGGATG
TCCAAAGGTT TGCTGCGTAA AGCGCGCAAC TTTGCAGAAG AGAACGTGCG TATCTTCAGT
GACGTGATTA ATGACCAGGT GCCTTTATTA GGCGTTGAAC CATCTGCGAT CCTGAGTTTT
CGGGATGAAT ATCCGGACCT GGTAAGAGAA GAACTGAGAG CAAAGGCGAA GCAACTGTCG
CCGAATGTAT TCCTGATCGA TGAATTCCTG AGTCGTGAGG CAGCTGCGGG TAATATCCCG
GCAACGCTCT TCACTACAGA GAAAAGACAG ATCAAACTGC ATGGGCATTG TCAGCAGAAA
GCGTTATCTA CCCCGCTGCA CAGTAAAAAT ATTCTGTCAC TGCCGGCTAA CTATTCTGTT
GAGATCATCC CTTCAGGATG TTGCGGTATG GCGGGTTCCT TCGGATATGA GAAAGAGCAC
TATGACCTTT CTATGGAGAT CGGCGAAATG GTATTATTCC CGGCGGTAAG AAATGCGGCG
GAAGAAACGA TCATTGCGGC GCCGGGTACA AGTTGCAGGC ACCAGGTAAA AGATGGTACC
GGCCGTAAAT CTCAGCACCC GGTAGAAATC CTGTACGAGG CATTGGTTTA A
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| Protein sequence | MRDKLRGLAR DLTGTLYDDD TMRTLYATDA SAYREMPLAV AIPAHEQDIK TLIAFARANK
TSLIPRTAGT SLAGQVVGNG IIVDVSRTFT KILEINTEEH WVRVQPGVIR DELNMFLKPY
GFYFGPETST ANRAMIGGMV GNNSCGSNSV VYGSTREHLL EVKAILSDGS DVVFNSISAD
EFHARCERND NSLETTVYRQ VRTLLGNHSN QEEIRREFPK PSITRRNTGY AVDLLLETAP
FTAGKEDFNF CKLIAGSEGT LAFLTEIKLN VSPLPPKETG LVCIHFNTVD ESLRANIIAM
KYKPSASELI DHFILECTKD NIEQSKNRFF VQGDPGAILV VEFCRDTRDG ITEIANQLIA
ELQAAGLGYH FPLLFGDDTK KIWTLRKAGL GLLSNLPGDE KAVPVIEDTA IDIDDLPAYI
RDFNDILKQY DLHAVHYAHA GSGEIHLRPI INLKTEEGNL LFRKIAEEIA TLVKKYNGSL
SGEHGDGRLR GEFIRQMIGD KNYTLLRDLK YTWDPENIFN PNKIVDTPSM NSMLRYTPGQ
KAPELKTIFH FPEQTILQHA EQCNGSGDCR KTEKSGGTMC PSYMATRNEK DTTRARANIL
REFLTNSTKE NRFDHKEIYE VLDLCLACKG CKSECPSNVD MAKLKMEFLQ HYHDANGVPF
RAKLISNFTR LNGLATIAPG IYNWMVNTPL TSNLIKKTSG FAIKRSLPEL QSTTLRSWFK
KQWPKEKSTV PATKKQVYLF CDEFTNFNDT HIGIKAVKLL HRLGYDVKMI EHPESARAWM
SKGLLRKARN FAEENVRIFS DVINDQVPLL GVEPSAILSF RDEYPDLVRE ELRAKAKQLS
PNVFLIDEFL SREAAAGNIP ATLFTTEKRQ IKLHGHCQQK ALSTPLHSKN ILSLPANYSV
EIIPSGCCGM AGSFGYEKEH YDLSMEIGEM VLFPAVRNAA EETIIAAPGT SCRHQVKDGT
GRKSQHPVEI LYEALV
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