| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4659 |
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| Symbol | |
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| ID | 8360832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5812434 |
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| End bp | 5813726 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966810 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003124298 |
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| Protein GI | 256423645 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000347403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000282037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGATC AGGAATTTAA CAGCTTATTG AAAAAATACA GGAACGGTGA ATGTACTCCT
GAAGAGCAGG CTCTTGTTGA GAGCTGGTAT CTTGAGTTGG AGGGTAGTTT GCCTGATCCT
GGCACTGCGG CTTGTGATAT GGTACAGCAA CGTATTTGGG AGCGTGTAAG GGAAACTTCT
CAGGTGGCTG AAATCCAGGA GTTGGAGGGC CATAAGAGGG TTACGCTGTT CAGGCGTTTC
GGGCCTGCGG TGGCTGCTGC GTGTCTGGTT GCTGCTGTGG CTACATTCTA TTTTAACAGA
CATCAGCAAA AGCAGCCTGC TCCTGTAGCG AAGAACGTAG TCGAAGATGC GCCTGCAGGT
ACGAATAAGG CGATTCTGAC TTTGGCTAAT GGACGGCGGA TTGCGCTTGA TGATGCGGCT
GACGGAACGC TGGCTGAGGA AAGCGGCGTG ACGATCAGGA AGAATAGTAA GGGGCAGTTG
GTGTATACTG TAGGTGATCC TGGCCTGCCT GGGGGTAACA CCCCTCTCTC CCCGCAAGGG
GGATCTCTCC CAGAGGGAGA GAGAAACAGA GTGGCGTATA ATACCATTTC TACGCCTAAT
GGTGGGCAGT ACCAGATTTA CTTGCCGGAT AGCAGTATGG TGTTTTTGAA TGCAGCCAGC
AGCCTGAAAT ACCCTGTTAA GTTCAACGGT ACGGAACGCC GTGTTGAACT TAAGGGTGAA
GGCTATTTTG AGATTACAAA GAATCCTGAT AAACCCTTTA GAGTTTATAG CGATAAGCAA
ACTATTGAAG TCCTGGGAAC ACATTTCAAT GTGTCCAGTT ATGATGCTGA ACCTACCACT
ACTACCCTAG CCGAAGGCCA GGTAAAAATC ACAACCTTCA GCTCGTCATA TCAAAGTACG
AAGCTACCCT CTGGCGAGAT TGCTTCGGAA GCTGCCCAAC CTCGCAATGA CGGAAAGAGC
TTTATCCTGA AGCCCGGCCA ACAAGCAATT CTCTCTGCCT CTGGGAGAAA TACCAACGGC
AGAGAAGGTA AATTTCAGAT TACCAGCGTG AACCCAGAGG AAGCTATTGC CTGGAAAGAT
GGGCTTTTCA TTTTCAGGAA TACGGAATTG AAAGATGTAT TGAGACAGCT GGCCAGATGG
TATGATGTCG AGGTCGATTA CAATTCAATT CCTGCGATAA GCATTGAAGG TGAACTGCCC
CGAAATGTGA GCCTGCTGAG GGTTTTACAA CTCATAGCGG CTTCGAGCAA TGTGTCACTT
AAACTAGAAG GAAGGAGGAT TATGCCAAAA TAA
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| Protein sequence | MTDQEFNSLL KKYRNGECTP EEQALVESWY LELEGSLPDP GTAACDMVQQ RIWERVRETS
QVAEIQELEG HKRVTLFRRF GPAVAAACLV AAVATFYFNR HQQKQPAPVA KNVVEDAPAG
TNKAILTLAN GRRIALDDAA DGTLAEESGV TIRKNSKGQL VYTVGDPGLP GGNTPLSPQG
GSLPEGERNR VAYNTISTPN GGQYQIYLPD SSMVFLNAAS SLKYPVKFNG TERRVELKGE
GYFEITKNPD KPFRVYSDKQ TIEVLGTHFN VSSYDAEPTT TTLAEGQVKI TTFSSSYQST
KLPSGEIASE AAQPRNDGKS FILKPGQQAI LSASGRNTNG REGKFQITSV NPEEAIAWKD
GLFIFRNTEL KDVLRQLARW YDVEVDYNSI PAISIEGELP RNVSLLRVLQ LIAASSNVSL
KLEGRRIMPK
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