Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4618 |
Symbol | |
ID | 8360791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5764936 |
End bp | 5765673 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966772 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003124260 |
Protein GI | 256423607 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.978262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.20317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCAG CATTAGTTAC AGGCGCCAAC AAAGGGATTG GCTTTGAAGT GGCCAAGATA CTCGCACAGA AAGGTTTTTT CGTTTATTTA GGTAGCCGCA CAATTGAAAA TGGATTGTCC GCAGTAGAAA AACTACGCGC TAAAGGACTA AATAATATAG CCGCCGTACA ACTGGATGTT AGCAGTCAGA CCTCTGTCGA TGCTGCACGC AGGGAGATCG GTGAGAAAAC CGATGTACTG GATGTGCTGG TCAATAATGC AGGTATTGCC GGTGGATTTG AGCAATCGGC ACTTACCTCC TCAGCGGATC AATATCTGTC CGTATTTGAT ACAAATTTAT TCGGCGTTGT AAGAACGACG CAGGCATTTA TTGATCTGCT TAGAAAGTCA TCCGAACCAA GGATCGTAAA CGTAAGCACC GCTATGGCAT CCCTGTCAAT GGCCGCAGAT ATTCAAAATA GTAATTACCC GAAACGGTAT GTCATTTACC AGTCTTCTAA AGCTGCACTG AATATGTACA CGGTACAACT GGCGTATGAA TTGCGCGATA CCGCATTTAA GGTGAATGCA GTTTGCCCGG GATGGACACA AACTGATTTT ACCATGCAAC AAGGCACCAA CACACCGGAA CAAGCAGGTG AACGTATTGC TAAATATGCA CTGATCGGCG CAGATGGACC AACCGCGCAA TATATCAGTG AAGAATACTT CCCTGAACCA GCGACTTGTC CCTGGTAA
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Protein sequence | MKSALVTGAN KGIGFEVAKI LAQKGFFVYL GSRTIENGLS AVEKLRAKGL NNIAAVQLDV SSQTSVDAAR REIGEKTDVL DVLVNNAGIA GGFEQSALTS SADQYLSVFD TNLFGVVRTT QAFIDLLRKS SEPRIVNVST AMASLSMAAD IQNSNYPKRY VIYQSSKAAL NMYTVQLAYE LRDTAFKVNA VCPGWTQTDF TMQQGTNTPE QAGERIAKYA LIGADGPTAQ YISEEYFPEP ATCPW
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